Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0352 ATGGGTCGTTTTAATCTCTCAATTCTTCTCTTTCTTTCTCTCAGTCTCTCTCTCTTTCCATCCTCCACCAAAGCTCAACTCAGACAAAATTTTTACTCCAGGATTTGCCCAAATGTTGAATCCATTGTTCGCTCAGAAGTTACCAAAAAATTTCAACAAACTTTTGTCACTGTCCCTGCTACCCTCCGCATGTTCTTTCATGATTGCTTCGTTCAGGGATGTGATGCATCGGTGCTTGTTGCCTCCACGGCTTCTAATAAGGCGGAAAAGGACCATCCTGATAACCTCTCGTTAGCCGGAGATGGATTCGATACCGTGATCAAAGCGAAAGCCGCCGTCGACGCCGTCCCGCAATGCCGGAACAAAGTCTCTTGCGCTGATATTCTAACCATGGCCACACGAGATGTTATAGCACTGACCGGAGGACCGTCGTACCCGGTGGAGCTTGGAAGATTAGATGGGTTGGTTTCGAGAGCTTCCGACGTCGAGGGGAAGCTTCCGGCACCGACATTTAATCTCAATCAGCTCAATTCCTTATTTGCCTCTAATGGTCTCACACAACAAGACATGATTGCTCTCTCAGCGGCGCACACGCTGGGATTTTCCCACTGCGGCAAGTTCGCCAACCGGATTTACACTTTTACCCCTGCAAACCCAGTGGACCCCACACTAAACAAAACATACGCAGTCCAATTACAGCAGATGTGTCCGAAAGATGTGGACCCCAGGATTGCTATTAACATGGACCCAATCACGCCGAGAACATTTGACAACGTTTACTTTAAGAATCTTCAACAAGGAATGGGCCTTTTTACCTCGGACCAAGTCTTGTTTACCGATGGAAGGTCCAGGCCCACTGTAAATACTTGGGCCTCTAATAATGTGGCCTTTAATGACGCCTTTGTTCTAGCCATGACCAAATTGGGCCGGGTCGGAGTCAAGACCGGAAGAAATGGTAATATCCGACGTGACTGTGGGGCATTCAATTGA 990 47.88 MGRFNLSILLFLSLSLSLFPSSTKAQLRQNFYSRICPNVESIVRSEVTKKFQQTFVTVPATLRMFFHDCFVQGCDASVLVASTASNKAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPQCRNKVSCADILTMATRDVIALTGGPSYPVELGRLDGLVSRASDVEGKLPAPTFNLNQLNSLFASNGLTQQDMIALSAAHTLGFSHCGKFANRIYTFTPANPVDPTLNKTYAVQLQQMCPKDVDPRIAINMDPITPRTFDNVYFKNLQQGMGLFTSDQVLFTDGRSRPTVNTWASNNVAFNDAFVLAMTKLGRVGVKTGRNGNIRRDCGAFN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 32436022 32437573 + evm.model.ptg000014l.856 HCH14g0352 558255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0352 329 Gene3D - 30 329 - -
HCH14g0352 329 ProSiteProfiles Plant heme peroxidase family profile. 26 329 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 FunFam Peroxidase 167 308 - -
HCH14g0352 329 FunFam Peroxidase 30 175 - -
HCH14g0352 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 PANTHER - 11 329 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 Pfam Peroxidase 43 293 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 Gene3D Peroxidase, domain 2 167 308 - -
HCH14g0352 329 CDD secretory_peroxidase 26 328 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
HCH14g0352 329 SUPERFAMILY Heme-dependent peroxidases 26 329 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0352 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
HCH14g0352 329 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0304 HCH-Chr12:1734955 HCH14g0352 HCH-Chr14:32436022 1.10E-112 dispersed
HCH13g0940 HCH-Chr13:12601632 HCH14g0352 HCH-Chr14:32436022 4.80E-119 dispersed
HCH13g0941 HCH-Chr13:12695733 HCH14g0352 HCH-Chr14:32436022 1.10E-112 dispersed
HCH14g0352 HCH-Chr14:32436022 HCH3g0311 HCH-Chr3:1968209 1.00E-76 dispersed
HCH14g0352 HCH-Chr14:32436022 HCH8g1358 HCH-Chr8:48399689 7.10E-78 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0352 K00430 - csv:101206860 560.836