Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0353 ATGATGCAATTCAGTGAGAGATTACATTTGCATCAAACGAGTTCATTTCAAGACCATTCTATGAATAAAAACCAAACCCAATTGAGAAACAGGCCATGGCCTGGATTTCCAACTTCCAAGGCCTTAGGAAGCTGCTTTAATGGTGATACTAATTGCATGGAACAATTGCTTGTTCACTGTGCCAATGCCATTGAAAGCAACGACGCCACTCTTGCTCAACAAATCCTTTGGGTCTTAAACAACATAGCCCCGCCCGACGGCGACTCCAATCAACGCCTCACTTCCGGCTTCCTCCGTGCCCTCATTACACGCGCTGCCACAAGCGGTAGCTGCAAAATGCTCGCTGCCATCACCAACGCTCATAATAACACTAATCTTTCCTTCATCACTCACAAATTCTCCCTCATGGAGCTTGCTGGTTTCGTCGACTTGACTCCGTGGCATCGCTTCGGTTTCACCGCTGCCAATGCCGCCATCCTTGAAGCCGTCGACGGGTTTTCGGTTATCCATATTGTTGATTTCAGCTTGATGCATTGCATGCAAATTCCGACCTTGATCGACGCCATCGCTAGCCGTTACGAAGTCCCACCGATACTCAAACTCACTGTCCCTGGAGCCATGAAAGACATTCCATGGCCCCCGCCGATGCTCGACCTCTCGTATGAAGAATTGGGATCAAAGCTGGTGAATTTTGCTAGGTCTAAGAACGTGAGCATGGAATTTAGGGTAATTCCTTCATGTTTCACAGATGGTTTTGCAAATTTAATCGAACAACTCAGAATGCAAAACTTAGTTTACCCTCTAAATAATGAGGCATTGGTCATAAACTGTCATATGATGCTTCATTACATTCCTGAGGAAACCCTCATAACCTCCATTCAAATTCCAAATTTCGACTTATCTTCTTCAATTCGAACGATGTTTCTTAAAGCAATCCGTAGCTTAGATCCCACAATTGTAATCTTAGTCGACGAAGATGCCGATTTGACATCGAACAAGTTAGTTTCAAGACTCCAATCAGCTTTTAATTACCTATGGATTCCTTACGACTCCATGGATTCGTTTCTTCCGAGAAGTAGTAAGCAGAGGGAATGGTATGAGGCTGACATCTGTTGGAAGATAGAGAATGTGATAGCTCATGAAGGAATTCAAAGGGTTGAGAGATTGGAACCTAAGAGCAGATGGGTTCAAAGAATGGCGGCCGCTAACTTCCGCGGCGTTCCGTTCGGAGAAGAGGCGGCGACAGAGGTGAAGACGATGCTCGATGAACATGCAGCGGGGTGGGGGTTGAAGAAAGAAGATGATCACCTAATGCTCACTTGGAAAGGCCATGAAGTAGTCTTTGCCACTGCTTGGCTGCCTTGCTAA 1368 45.76 MMQFSERLHLHQTSSFQDHSMNKNQTQLRNRPWPGFPTSKALGSCFNGDTNCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTSGFLRALITRAATSGSCKMLAAITNAHNNTNLSFITHKFSLMELAGFVDLTPWHRFGFTAANAAILEAVDGFSVIHIVDFSLMHCMQIPTLIDAIASRYEVPPILKLTVPGAMKDIPWPPPMLDLSYEELGSKLVNFARSKNVSMEFRVIPSCFTDGFANLIEQLRMQNLVYPLNNEALVINCHMMLHYIPEETLITSIQIPNFDLSSSIRTMFLKAIRSLDPTIVILVDEDADLTSNKLVSRLQSAFNYLWIPYDSMDSFLPRSSKQREWYEADICWKIENVIAHEGIQRVERLEPKSRWVQRMAAANFRGVPFGEEAATEVKTMLDEHAAGWGLKKEDDHLMLTWKGHEVVFATAWLPC 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 32481278 32482645 - evm.model.ptg000014l.855 HCH14g0353 558256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0353 455 ProSiteProfiles GRAS family profile. 44 453 IPR005202 -
HCH14g0353 455 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 47 452 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
HCH14g0353 455 Pfam GRAS domain family 53 452 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0353 HCH-Chr14:32481278 HCH7g0209 HCH-Chr7:1426926 3.00E-103 dispersed
HCH14g0353 HCH-Chr14:32481278 HCH3g1373 HCH-Chr3:51501680 4.50E-30 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
32920 PF03514 GRAS 4.40E-92 CL0063 HCH TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0353 - - - 0.0