Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0354 ATGAGTTGCAATGGTTGTCGCGTCCTGCGCAAAGGATGCAGCGAATCTTGTATTCTTCGACCTTGTTTACAATGGATCGAAACTTCCGAAGCTCAAGGCCACGCCACCGTTTTCGTTGCTAAATTCTTCGGCCGTGCTGGCCTCATGTCTTTCATCTCCGCTGTCCCTCATTCCCAACGACCTTCTTTGTTTCAATCTTTATTGTTTGAAGCTTGTGGGCGTACGGTCAATCCTGTTAACGGAGCTGTGGGGCTTTTATGGACGGGGAATTGGCATGTTTGTCAAGCGGCGGTGGAAACTGTCTTGCGTGGCGGTACGTTACGGCCGATGACGGAATTTCTCGCGGGTGGGTCACTGAATCTGGCCGCCGACGAGGCGTCGGAGGCTGAAGTTACCTGTACGGATATATGGAAGCTTCGTGATTCTTATCCCAATTCTCGATTCTCTAATTCGCGATCTCGGCTTTCACCGAAGAGGAAGAGATCGGAGGAATCGACGAAACAGCAACTGAACGATCTGGATCTCCGGTTGACGCCGAGTTTGACGGTGAAGGAGACACGGCGGTCGGGAACTCCGTCGATGAATTCCGAGGAATCGGAAACCACGACTTGCTCGGGAGATCGTCAGTATTCGGAAGAAGGAGAGAGAAAGCTTCTGAATTTGTTTGTTTGA 672 51.04 MSCNGCRVLRKGCSESCILRPCLQWIETSEAQGHATVFVAKFFGRAGLMSFISAVPHSQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMTEFLAGGSLNLAADEASEAEVTCTDIWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKQQLNDLDLRLTPSLTVKETRRSGTPSMNSEESETTTCSGDRQYSEEGERKLLNLFV 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 32507561 32508373 - evm.model.ptg000014l.854 HCH14g0354 558257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0354 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 223 - GO:0010468(PANTHER)
HCH14g0354 223 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
HCH14g0354 223 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
HCH14g0354 223 MobiDBLite consensus disorder prediction 184 212 - -
HCH14g0354 223 MobiDBLite consensus disorder prediction 146 170 - -
HCH14g0354 223 MobiDBLite consensus disorder prediction 156 170 - -
HCH14g0354 223 MobiDBLite consensus disorder prediction 184 208 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0354 HCH-Chr14:32507561 HCH9g0366 HCH-Chr9:2278680 1.20E-41 dispersed
HCH12g0564 HCH-Chr12:3326954 HCH14g0354 HCH-Chr14:32507561 7.40E-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
32921 PF03195 LOB 2.80E-25 No_clan HCH TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0354 - - - 0.0