Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0363 ATGGATACTTTGTTTAGGCTTGTGAATCTTCAATCTGATCAATCTTACAACTCGAGTAGAACTAATTCTAGCAGCTCTAGATCTTCAAGACAATACCAATATCATAGTTACCATCAACAAGAAGACGAAGAATGCTACAATCTTCTCATGGATGAGGAAGATTTCTCATCGTCTAGTAATTCTAGACAATACTATAATCCCTATCAACCCCACCCAACTTCTACAACCACCACCACCACCACCACCGGCACCACCACCCCGATCGATCAGTTCTCTTTCTACCCCTCTCCCGATATCAACTTTGAATTCTCCGGTCGATGGGCCCCGGATATTCTCCTTGAAACTGCAAGAGCTATATCTGATAGAAACAGTGCTCGTGTTCAACAACTCATGTGGATGCTAAATGAGCTAAGCTCCCCTTACGGCGACACCGATCAAAAGCTCGCCGCGTACTTCCTACAAGCTTTGTTTAGCCGCATGACCGACTCCGGCACGCGCAATTATCGCGCTTTAGCTTCGGCATCGGACAAAACATGTTCATTCGAATCAACCCGAAAAATGATGCTCAAATTTCAGGAAGTTAGTCCATGGACTACATTTGGTCATGTTTCTTGTAACGGTGCATTAATTGAAGCTTTAGAAGGAGAATCAAAGCTACACATAATTGACATAAGCAATACCTATTGCACTCAATGGCCTACTTTACTAGAAGCCCTAGCAACTCGTACCGACGACACACCTCACCTCCGTCTTACGACGATCATAACCACCAGAACCGGTGGCGGAAACGGCATCGCCGCAGCTCAAAAGGTAATGAAAGAAATAGGAACAAGAATGGAAAAATTCGCTAGGCTTATGGGCGTACCTTTCAAATTCAATGCGTTATATCACTCCGGCGATCTTTCAGAATTTGACCTAACCAAATTAGACGTCAAAGAAGACGAAGCGCTCGCGATAAACTGCGTCGGCGCCTTACGTTCCGTCGCGGCGATAAACAACCGTCGCGATTTCTTCATTTCATCTTTCCGCAATCTACGGCCAAGGATTATCACCGTGATCGAAGAAGAAGCCGATCTCGAAGTCGGCGTCGACGGCGCAGAATTCTTCAGAGGGTTTCAAGAATGTTTACGATGGTTTAGGGTTTACTTCGAGACCTTGGATGAGAGTTTCTCAAGAACAAGCAACGAACGTTTGATGCTTGAACGAGCAGCCGGCCGTGCGATCGTCGACTTGGTGGCATGTTCACCGGCCGATTCAGTTGAACGGCGGGAAACGGCGGCGCGTTGGGCTCAACGCATGCATGGAAATGGATTCAATCCTGTTTCTTTTAGTGATGAAGTTTCCGACGACGTAAGGGCTTTATTGAGAAGGTATAAAGAAGGGTGGGCAATGACACAGAATTCGGACGTCGCCGGAATATTCTTGACGTGGAAAGAGCAGCCGGTGGTGTGGGCCAGTGCGTGGAGGCCTTGA 1473 46.91 MDTLFRLVNLQSDQSYNSSRTNSSSSRSSRQYQYHSYHQQEDEECYNLLMDEEDFSSSSNSRQYYNPYQPHPTSTTTTTTTTGTTTPIDQFSFYPSPDINFEFSGRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGTRNYRALASASDKTCSFESTRKMMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALATRTDDTPHLRLTTIITTRTGGGNGIAAAQKVMKEIGTRMEKFARLMGVPFKFNALYHSGDLSEFDLTKLDVKEDEALAINCVGALRSVAAINNRRDFFISSFRNLRPRIITVIEEEADLEVGVDGAEFFRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSPADSVERRETAARWAQRMHGNGFNPVSFSDEVSDDVRALLRRYKEGWAMTQNSDVAGIFLTWKEQPVVWASAWRP 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 32631160 32632632 - evm.model.ptg000014l.845 HCH14g0363 558266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0363 490 MobiDBLite consensus disorder prediction 14 37 - -
HCH14g0363 490 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 69 488 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0008356(PANTHER)|GO:0009956(PANTHER)|GO:0043565(PANTHER)|GO:0045930(PANTHER)|GO:0048366(PANTHER)|GO:0055072(PANTHER)
HCH14g0363 490 MobiDBLite consensus disorder prediction 57 85 - -
HCH14g0363 490 Pfam GRAS domain family 111 489 IPR005202 -
HCH14g0363 490 ProSiteProfiles GRAS family profile. 99 489 IPR005202 -
HCH14g0363 490 MobiDBLite consensus disorder prediction 14 35 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0056 HCH-Chr10:469933 HCH14g0363 HCH-Chr14:32631160 5.00E-122 dispersed
HCH14g0363 HCH-Chr14:32631160 HCH9g0872 HCH-Chr9:6250684 4.10E-37 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
32924 PF03514 GRAS 1.60E-104 CL0063 HCH TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0363 K27743 - csv:101204711 828.935