Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0364 ATGGGGAAGAAGCAACACAGTAAAGACCGTTTATTCATAACCAAAACCGAATGGGCCACTGAATGGGGTGGCGCCAAATCCAAGGCCTCTCAAACCCCTTTCAAAAGACTTCCTTTTTATTGCTGCGCTCTTACATTTACCCCCTTTGAAGATCCTGTATGTACCACTGATGGCAGCGTTTTTGAGCTTATGCATATCATTCCTTACATTCGAAAGTATGGAAAACATCCTGTTACTGGAGCTCCTTTGAATCAGGAGGATTTAATTCCACTTGTTTTTCATAAAAATTCTGAAGGTGAGTTTCAGTGCCCTGTATTGAACAAGGTTTTTACGGAGTTTACGCACATAGTTGCTATAAGGACCTCGGGAAATGTATTTTGCTATGAGGCAATTAAAGAATTAAATGTCAAAACAAAGAACTGGAAGGAGCTTCTCACTGATGAACCATTTACTAGGGAAGATATTATTACTATACAGAACCCTACTGCACTTGACAGCAAGGTTCTCCTGGATTTTGATCATGTGAAAAATGACCTGAAAATTGATGATGAAGAACTTAAGAAAATGAATTCAGATCCAACATATAACATAAATGTCTCGGGGGATATCAAGCAGATGCTGGAGGAGCTTGGAACTGAAAAAGGAAGGCAAACTGCCCTTCATGGGGGAGGTGGTGGCAAGGCACAGAAAGAAAGGGCTGCTGCACTTGCTACTATCTTAGATGCGAGGTCACGTATCAAAGAGGATTCCAAGGAAAAGGCAAATGGAGGGGAGAAATCTGCACAGGCATACAGTATTGTGGATGCTGCATCTGCTTCTGTACATGGAAGAAGTGCTGCTGCTGCAAAAGTCACCTCAAGTGAAAAAACTGCTGCTCGAATTGCAATGCACTTGGCGGGTGAGAGGGAACCGGTGAATGCAAAGATGGTAAAGAGTCGTTACACTACTGGTGCTGCATCGCGATCCTTCACATCTACATCTTATGATCCTGTTACTAAAAATGAACATGAGTATATCAAAGTTGAGAAAAATCCCAAGAAAAAAGGATATGTGCAGTTACACACAACACATGGAGATTTGAATATCGAACTGCATTGCGATATTACACCGAGGGCATGTGAGAACTTCATAACACTTTGTGAAAGGGGCTACTACAATGGAGTTGCCTTTCACAGAAGTATTAGGAACTTTATGATTCAAGGTGGTGATCCAACTGGTACTGGGAGAGGAGGAGAATCTATATGGGGAAAGCCTTTTAAAGATGAAGTCCACTCCAAGTTGCTTCATTCTGGAAGGGGCGTCGTCAGTATGGCAAATAGTGGTCCCCACACCAATGGTTCCCAGTTCTTTATTCTCTACAAATCTGCAAATCACTTAAACTTCAAGCATACAGTATTTGGTGGCGTTGTGGGTGGTTTGACTGCTTTGGCAGCAATGGAAAAGGTTCCGGTGGATGACAATGATCGGCCTCTGGAGGAGATCAAGATAACAAGTATCACAGTTTTTGTCAATCCATACTTAGAACCTGATGAAGAGGAAGAAAAGCCCAAAGACGAAAAGAATGTTGAAGATGAAGAAAATGATAAGGTTGGATCATGGTATAGTAATCCAGGCACCGGAATTGCTGAAAACGGAGCTGGCGGTGGTGGTGTTGGGAAGTACTTGAAAGCAAAGAATGCCCAATCCAAATCTCCTGCCGTTAACGGTAATCAAACAGTAACTGCCTCAACCAAGAAAAGGACGGCCGCAGGAGAATTCAAAGACTTCTCTTCATGGTAA 1779 42.5 MGKKQHSKDRLFITKTEWATEWGGAKSKASQTPFKRLPFYCCALTFTPFEDPVCTTDGSVFELMHIIPYIRKYGKHPVTGAPLNQEDLIPLVFHKNSEGEFQCPVLNKVFTEFTHIVAIRTSGNVFCYEAIKELNVKTKNWKELLTDEPFTREDIITIQNPTALDSKVLLDFDHVKNDLKIDDEELKKMNSDPTYNINVSGDIKQMLEELGTEKGRQTALHGGGGGKAQKERAAALATILDARSRIKEDSKEKANGGEKSAQAYSIVDAASASVHGRSAAAAKVTSSEKTAARIAMHLAGEREPVNAKMVKSRYTTGAASRSFTSTSYDPVTKNEHEYIKVEKNPKKKGYVQLHTTHGDLNIELHCDITPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGRGGESIWGKPFKDEVHSKLLHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGLTALAAMEKVPVDDNDRPLEEIKITSITVFVNPYLEPDEEEEKPKDEKNVEDEENDKVGSWYSNPGTGIAENGAGGGGVGKYLKAKNAQSKSPAVNGNQTVTASTKKRTAAGEFKDFSSW 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 32636697 32639924 - evm.model.ptg000014l.844 HCH14g0364 558267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0364 592 ProSiteProfiles U-box domain profile. 35 108 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
HCH14g0364 592 MobiDBLite consensus disorder prediction 561 579 - -
HCH14g0364 592 FunFam Peptidyl-prolyl cis-trans isomerase cyp65 331 515 - -
HCH14g0364 592 MobiDBLite consensus disorder prediction 508 530 - -
HCH14g0364 592 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 350 501 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
HCH14g0364 592 Gene3D - 330 514 IPR029000 -
HCH14g0364 592 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 433 448 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
HCH14g0364 592 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 364 379 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
HCH14g0364 592 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 390 402 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
HCH14g0364 592 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 448 460 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
HCH14g0364 592 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 461 476 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
HCH14g0364 592 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 95 IPR013083 -
HCH14g0364 592 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 354 501 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
HCH14g0364 592 FunFam Peptidyl-prolyl cis-trans isomerase 2 41 96 - -
HCH14g0364 592 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 338 512 IPR044666 GO:0000209(PANTHER)|GO:0061630(PANTHER)|GO:0071013(PANTHER)
HCH14g0364 592 MobiDBLite consensus disorder prediction 506 592 - -
HCH14g0364 592 SUPERFAMILY RING/U-box 37 104 - -
HCH14g0364 592 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 385 402 IPR020892 GO:0003755(InterPro)|GO:0006457(InterPro)
HCH14g0364 592 CDD RING-Ubox_PPIL2 38 110 IPR026951 -
HCH14g0364 592 SMART Ubox_2 39 101 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
HCH14g0364 592 CDD cyclophilin_RING 350 506 - -
HCH14g0364 592 SUPERFAMILY Cyclophilin-like 350 506 IPR029000 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0489 HCH-Chr12:2862204 HCH14g0364 HCH-Chr14:32636697 2.60E-39 dispersed
HCH14g0364 HCH-Chr14:32636697 HCH7g1556 HCH-Chr7:48029651 9.50E-49 dispersed
HCH14g0364 HCH-Chr14:32636697 HCH7g0626 HCH-Chr7:6081072 1.70E-29 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0364 K10598 - csv:101204462 1035.4