Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH14g0388 | ATGAATAATGTCAATGGTAGCAGCAGCAGTTGTAACTGGCTAGGTTTCTCTGTCTCTCCCAGCATTAACATGGAGCTTTCTTCTTCCTCTTCTGCTACTGCTGTTTCCCATTCCATTCCTTCAAGTTTTTTCCACTCCCCATCACAGTTTAACTATGGCATTTGCTATGGTGTTGTTGATGGAGAAAATGGTGGTTTTTATTCTCCTTCTCCAGTGATGCCTCTCAAGTCTGATGGCTCCATTTGTTCAATGGAAGCTCTCACTAGGCATCATCCTGCACAAGTGGTGAATAGCTCTACTCCAAAACTAGAAGATTTCTTTGGTGGTGCAACCATGGCCATGGGGTCCCATCACTATGAAAGCAATGACAGAGAAGCTATGGCTCTCAGCTTAGACAGCATATTTTGCCACCAAAATCCAACTCATCATGAGCCCAACAACCAACCCTTCTCCCATTTCTCACATTTAAGAAGAAATGAAGTCATGCTTCAAGAGGGATATAATCTGCAGCACCCACCAACAGTAGCAGGAAATGAGATTTCTGATATGAAGAATTGGGTCATTCCAAGAAACTATACAGCACCTAATGGTTCATTTGAGCAGAAAATGGAAACTTGCATGAGTGAAAATGGATCAGTTAATGCCATGGCTTATGGAGATTTACAATCATTGAGCTTGTCTATGAATATGAGCCCAAGTTCTCAGTCAAGTTGTGTTACAGGCACAGTCTCAGCTGCTGTCAATGATTCTTCTATTATGGATACAAAGAAGAGAGGGCATGAGAAGTTGGATCAAAAGCAAATTGTACATAGGAAGTCTCTTGATACTTTTGGACAAAGAACCTCACAGTATAGAGGGGTTACAAGACACAGATGGACTGGTAGGTATGAAGCACATTTATGGGACAACAGTTGCAAGAAAGAAGGTCAAAGCAGGAAAGGAAGACAAGTATACCTTGGAGGCTATGATATGGAAGAAAAAGCTGCTAGAGCTTATGATCTTGCTGCACTCAAGTATTGGGGACCCTCCACCCACATCAACTCTCCTTTGGAGAACTATCAGAAGGAATTAGAGGAAATGAAAAACATGAGCAGACAGGAATATGTTGCTCACCTGAGAAGGAGAAGCAGTGGATTCTCGAGGGGCGCCTCGATTTACAGAGGTGTTACAAGACATCATCAACATGGAAGATGGCAAGCGCGGATTGGCCGAGTTGCTGGTAACAAGGATCTGTATCTTGGGACATTCAGCACTCAAGAGGAAGCAGCCGAGGCCTATGATATAGCGGCTATAAAATTCCGAGGGATGAATGCTGTTACTAACTTCGACATTACAAGGTATGACGTTGAACGGATCATTGCAAGCAATACCCTCCTTAGCGGCGATCTCGCCAGGAGAAAGCAACAGCAGCAGCAGCAACATCAGCCAGAGTTTGATAATGGGACTATCAGACAAAGCCCTCCTACTCACAACAGCAATGGGGAGGCTATACCTTTACCTTTACCTTCACAGAGTAATCAGAGTGAATCAGAATGGAAGATGGCACTATATCAGTCCTCTCAACAACTTGTCCCGAAACCCCGGTTGATGTCTGTGACAACCGATGAAGGTTCACTAATGGGAGTCGAAGACTCTGCCAAAATGGGGGCTCACTTCTCCAATGCCTCTTCAATGGTGACAAGCTGCAGCTTGAGCAGCTCAAGGGAAGACAGTCCAGACAAGACCAGCCTATCTATGGTGTTCGGAATGCCACAGTCTACACCCAAGATGTTCGTCGCCCCACCTACTGCTAGTAATATGAATTCCTCCTGGATTGCATCTGCCCAGCAGCTGAGAGCTGCAAATTGTATGACCCAGATGCCAGTTTTTGCTGCTTGGACTGACACTTAA | 1890 | 44.71 | MNNVNGSSSSCNWLGFSVSPSINMELSSSSSATAVSHSIPSSFFHSPSQFNYGICYGVVDGENGGFYSPSPVMPLKSDGSICSMEALTRHHPAQVVNSSTPKLEDFFGGATMAMGSHHYESNDREAMALSLDSIFCHQNPTHHEPNNQPFSHFSHLRRNEVMLQEGYNLQHPPTVAGNEISDMKNWVIPRNYTAPNGSFEQKMETCMSENGSVNAMAYGDLQSLSLSMNMSPSSQSSCVTGTVSAAVNDSSIMDTKKRGHEKLDQKQIVHRKSLDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINSPLENYQKELEEMKNMSRQEYVAHLRRRSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGMNAVTNFDITRYDVERIIASNTLLSGDLARRKQQQQQQHQPEFDNGTIRQSPPTHNSNGEAIPLPLPSQSNQSESEWKMALYQSSQQLVPKPRLMSVTTDEGSLMGVEDSAKMGAHFSNASSMVTSCSLSSSREDSPDKTSLSMVFGMPQSTPKMFVAPPTASNMNSSWIASAQQLRAANCMTQMPVFAAWTDT | 629 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 32888056 | 32891196 | + | evm.model.ptg000014l.820 | HCH14g0388 | 558291 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH14g0388 | 629 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 282 | 351 | - | - | |
HCH14g0388 | 629 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 205 | 504 | - | - | |
HCH14g0388 | 629 | MobiDBLite | consensus disorder prediction | 463 | 510 | - | - | |
HCH14g0388 | 629 | SUPERFAMILY | DNA-binding domain | 282 | 349 | IPR016177 | GO:0003677(InterPro) | |
HCH14g0388 | 629 | ProSiteProfiles | AP2/ERF domain profile. | 283 | 349 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0388 | 629 | Pfam | AP2 domain | 386 | 436 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0388 | 629 | Pfam | AP2 domain | 283 | 341 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0388 | 629 | Gene3D | AP2/ERF domain | 282 | 350 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0388 | 629 | Gene3D | AP2/ERF domain | 385 | 445 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0388 | 629 | SUPERFAMILY | DNA-binding domain | 384 | 444 | IPR016177 | GO:0003677(InterPro) | |
HCH14g0388 | 629 | CDD | AP2 | 282 | 349 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0388 | 629 | ProSiteProfiles | AP2/ERF domain profile. | 385 | 443 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0388 | 629 | Coils | Coil | 350 | 370 | - | - | |
HCH14g0388 | 629 | PRINTS | Ethylene responsive element binding protein signature | 425 | 445 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0388 | 629 | PRINTS | Ethylene responsive element binding protein signature | 284 | 295 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0388 | 629 | FunFam | AP2-like ethylene-responsive transcription factor | 384 | 445 | - | - | |
HCH14g0388 | 629 | SMART | rav1_2 | 385 | 449 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0388 | 629 | SMART | rav1_2 | 283 | 355 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0388 | 629 | CDD | AP2 | 384 | 445 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH14g0388 | HCH-Chr14:32888056 | HCH6g0075 | HCH-Chr6:918144 | 2.80E-107 | dispersed | |
HCH12g0534 | HCH-Chr12:3144113 | HCH14g0388 | HCH-Chr14:32888056 | 2.10E-136 | wgd | |
HCH14g0388 | HCH-Chr14:32888056 | HCH4g0569 | HCH-Chr4:3729795 | 4.90E-152 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
32931 | PF00847 | AP2 | 1.20E-13 | CL0081 | HCH | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH14g0388 | K09285 | - | csv:101203323 | 985.326 |