Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0409 ATGCATTTTCTTCTTCTTCTTCTTCTTTGTCTTCTTCAACTCCATATTCAATCTTCTCTCTCCGCTCATGTTTCTGAATACCGTGCTCTTCTCTCTCTAAAAACCTCTATTTCTGATGACCCTCGTTCCTCTCTCTCTTCATGGAACGTCTCCACCAGTCACTGTACTTGGTCCGGTGTCACGTGCGATTTCCGTCGTCACGTGACATCTCTCGACCTTTCCGACCTCGGCCTCTCCGGCACTCTTTCCTCTGACATTTCTTATCTTCGTTTTCTCTCTAATCTCTCCCTAGGCGCCAACCTATTCTCCGGTCCAATCCCGCCGGAGATTTCTTCCCTCTCTAATCTACGTTCTCTCAATCTTTCTAATAATGTATTCAATGGGTCATTCCCTAAGGAGCTTTCGGTTCTTCAAAACCTCCAAGTTCTTGACTTGTATAACAACAACATGACCGGAGAATTCCCCGTTCCTGTCACCGAAATGCCGAATCTTCGCCATTTGCATTTGGGTGGAAACTTTTTCTCCGGCCGGATCCCTCCGTCGGTCGGAAAAATGGTGGGTTTGGAGTATTTTGCGGTTTCCGGTAACGAGCTCGACGGGCAGATTCCACCGGAGATCGGAAACTTGACGAATCTTCGTGAACTCTATATTGGTTACTTTAATGCTTACGACGGCGGTATCCCGCCGGAGATTGGGAACTTATCGGAGTTAGTACGATTGGATGCGGCAAACTGTGGACTTTCCGGCAAGATTCCGCCGGAAGTCGGAAAGTTGCAAAACCTCGACACGTTGTTTCTTCAAGTGAATGCTTTGACGGGGCCATTGATAGATGAGATTGGAGGATTGAGAAGCTTGAAATCATTGGATTTGTCGAATAATATGTTCGTGGGTGAGATTCCTTATTCGTTTTCTGAGTTAAAAAACTTAACTTTATTGAATCTGTTTAGAAATAAGCTTCATGGGGTTATTCCTGATTTTATTGGGGACTTGCCTAAGCTTGAAGTTTTGCAGTTGTGGGAAAATAATTTTACAGAATCTATTCCCCAGAACCTTGGTAGAAATGGGATGCTTCAACTTTTGGATCTTTCCTCTAATAAATTGACTGGATTTCTTCCTCCTGATATGTGTTATGGAAATAGACTTCAGACATTGATTGCATTAGGGAATTTCTTGTTTGGTCCTATCCCGGAATCCTTAGGAGAATGTGTTTCTTTGAATCGTATTCGTTTAGGGGAGAATTTTCTCAATGGATCGATTCCGAAAGGACTTTTGAGTTTGCCTAAACTCTCTCAGGTTGAGTTGCAGGATAATTTTCTTTCGGGGGAGTTTCCGATTACGGAATCAATCTCGGAAAATCTTGGTCAGATTAGTCTATCAAATAATCGGCTTTCGGGTTCGATTCCGCCTTCTGTTGGAAACTTTCCTGGTGTTCAAAAACTACTTCTTGATGGGAATAAGTTTTCGGGTCAAATCCCGCCTGAGATTGGGAAGTTGCAGCAGCTTTCGAAGATTGATTTTAGTCACAATGTGTTGTCGGGTCGAATCGCACCGGAGATAAGCCAATGTAAGCTTCTTACGTTTGTCGATCTCAGTCGAAATGAGCTAACTGGAGAAATTCCGAATGAGATTACGAGTATGAGGATATTGAATTATCTGAATCTCTCCAAGAACCATTTAGTTGGAAATATTCCTTCTTCCATTGCTGGCATGCAGAGCTTGACTTCTGTGGATTTCTCTTACAACAATCTCACTGGTCTTGTTCCTGGAAGTGGCCAATTTAGTTACTTCAATTACACTTCGTTTCTGGGAAATCCTGATCTCTGTGGTCCATATTTGGGGCCTTGCAAAGATGGGGTTGCTAATAGCAATTACCAAGAACATGTGAAAGGGCGTCTGTCTGCTTCTGTTAAGCTCCTTCTTGTTATTGGATTGCTTCTATGTTCCATTGCATTTGCTGTTGCTGCAATCATTAAAGCTCGGTCATTGAAGAGAGCGAGCAATTCGCGAGCTTGGAAATTAACATCATTCCAACGATTGGATTTCACAGTTGATGATGTTTTGGATTGCTTGAAGGAGGATAATATAATTGGGAAAGGAGGCGCTGGCATTGTTTATAAAGGGGCGATGCCGAGCGGCGACCAGGTCGCTGTGAAAAGGCTGCCAGTGATGAGTCGTGGATCGTCCCACGACCATGGATTTAATGCTGAGATCCAAACTCTGGGAAGGATTCGACACCGACACATTGTTAGATTGTTGGGTTTCTGCTCAAACCATGAGACTAATCTCTTGGTATATGAGTACATGCCTAATGGGAGCTTAGGTGAAGTTCTTCATGGCAAGAAAGGTGGTCACTTGCAGTGGGATACAAGATATAAGATAGCCATCGAAGCAGCTAAAGGACTCTGCTATCTTCACCATGATTGCTCACCGCTTATCGTTCATCGAGACGTGAAATCAAACAATATACTGTTGGATACCAATTTTGAAGCTCATGTTGCTGATTTCGGCCTTGCCAAGTTCTTACAGGATTCCGGTGCATCGGAGTGCATGTCGGCGATTGCTGGTTCTTATGGATATATTGCCCCAGAATACGCCTATACCCTGAAGGTAGATGAGAAGAGTGATGTGTATAGCTTCGGGGTCGTCCTCTTGGAGCTCGTTAGCGGTAGAAAACCCGTCGGAGAATTTGGTGACGGGGTCGACATAGTTCAATGGGTTAGAAAAATGACAGACTCAAACAAGGAAGAGGTACTAAAAGTCATAGATCCAAGGCTGTCCTCAGTTCCTCTTCATGAGGTGATGCATGTTTTCTACGTCGCAATGCTCTGCGTCGAAGAACAAGCTGTGGAGCGTCCGACCATGCGGGAAGTCATCCAAATCCTATCAGAGATTCCACAGCCACCATGCTCAAAGCCGGATGACTCAACCACCGTCACAATCTCCTCACCGCCACCCGTAGCCGCCATGTTAGAGCCTCCAACCAGGGAAACCAAGAACAAAAAAGACAACCAACAACCCCCTCGTGATCTCCTTAGCATTTGA 3042 44.51 MHFLLLLLLCLLQLHIQSSLSAHVSEYRALLSLKTSISDDPRSSLSSWNVSTSHCTWSGVTCDFRRHVTSLDLSDLGLSGTLSSDISYLRFLSNLSLGANLFSGPIPPEISSLSNLRSLNLSNNVFNGSFPKELSVLQNLQVLDLYNNNMTGEFPVPVTEMPNLRHLHLGGNFFSGRIPPSVGKMVGLEYFAVSGNELDGQIPPEIGNLTNLRELYIGYFNAYDGGIPPEIGNLSELVRLDAANCGLSGKIPPEVGKLQNLDTLFLQVNALTGPLIDEIGGLRSLKSLDLSNNMFVGEIPYSFSELKNLTLLNLFRNKLHGVIPDFIGDLPKLEVLQLWENNFTESIPQNLGRNGMLQLLDLSSNKLTGFLPPDMCYGNRLQTLIALGNFLFGPIPESLGECVSLNRIRLGENFLNGSIPKGLLSLPKLSQVELQDNFLSGEFPITESISENLGQISLSNNRLSGSIPPSVGNFPGVQKLLLDGNKFSGQIPPEIGKLQQLSKIDFSHNVLSGRIAPEISQCKLLTFVDLSRNELTGEIPNEITSMRILNYLNLSKNHLVGNIPSSIAGMQSLTSVDFSYNNLTGLVPGSGQFSYFNYTSFLGNPDLCGPYLGPCKDGVANSNYQEHVKGRLSASVKLLLVIGLLLCSIAFAVAAIIKARSLKRASNSRAWKLTSFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGAMPSGDQVAVKRLPVMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLQWDTRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLDTNFEAHVADFGLAKFLQDSGASECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKMTDSNKEEVLKVIDPRLSSVPLHEVMHVFYVAMLCVEEQAVERPTMREVIQILSEIPQPPCSKPDDSTTVTISSPPPVAAMLEPPTRETKNKKDNQQPPRDLLSI 1013
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 33102975 33106473 - evm.model.ptg000014l.799 HCH14g0409 558312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0409 1013 Gene3D Transferase(Phosphotransferase) domain 1 768 976 - -
HCH14g0409 1013 Gene3D Ribonuclease Inhibitor 379 502 IPR032675 -
HCH14g0409 1013 Gene3D Ribonuclease Inhibitor 217 376 IPR032675 -
HCH14g0409 1013 ProSiteProfiles Protein kinase domain profile. 690 964 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0409 1013 SUPERFAMILY RNI-like 70 392 - -
HCH14g0409 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0409 1013 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 659 767 - -
HCH14g0409 1013 Pfam Leucine Rich Repeat 357 376 IPR001611 GO:0005515(InterPro)
HCH14g0409 1013 Pfam Leucine Rich Repeat 284 306 IPR001611 GO:0005515(InterPro)
HCH14g0409 1013 Pfam Leucine Rich Repeat 237 258 IPR001611 GO:0005515(InterPro)
HCH14g0409 1013 Pfam Leucine Rich Repeat 549 570 IPR001611 GO:0005515(InterPro)
HCH14g0409 1013 Pfam Leucine Rich Repeat 115 136 IPR001611 GO:0005515(InterPro)
HCH14g0409 1013 Pfam Leucine Rich Repeat 525 546 IPR001611 GO:0005515(InterPro)
HCH14g0409 1013 Pfam Leucine Rich Repeat 452 474 IPR001611 GO:0005515(InterPro)
HCH14g0409 1013 Pfam Leucine Rich Repeat 478 498 IPR001611 GO:0005515(InterPro)
HCH14g0409 1013 Pfam Leucine Rich Repeat 308 330 IPR001611 GO:0005515(InterPro)
HCH14g0409 1013 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
HCH14g0409 1013 Gene3D Phosphorylase Kinase; domain 1 655 767 - -
HCH14g0409 1013 Pfam Protein kinase domain 692 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0409 1013 SMART serkin_6 690 960 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0409 1013 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 83 326 - -
HCH14g0409 1013 MobiDBLite consensus disorder prediction 969 983 - -
HCH14g0409 1013 Gene3D Ribonuclease Inhibitor 503 615 IPR032675 -
HCH14g0409 1013 SUPERFAMILY L domain-like 297 615 - -
HCH14g0409 1013 SUPERFAMILY Protein kinase-like (PK-like) 682 961 IPR011009 -
HCH14g0409 1013 SMART LRR_typ_2 355 378 IPR003591 -
HCH14g0409 1013 SMART LRR_typ_2 330 354 IPR003591 -
HCH14g0409 1013 SMART LRR_typ_2 161 185 IPR003591 -
HCH14g0409 1013 SMART LRR_typ_2 570 593 IPR003591 -
HCH14g0409 1013 SMART LRR_typ_2 306 329 IPR003591 -
HCH14g0409 1013 SMART LRR_typ_2 113 137 IPR003591 -
HCH14g0409 1013 SMART LRR_typ_2 498 522 IPR003591 -
HCH14g0409 1013 SMART LRR_typ_2 282 305 IPR003591 -
HCH14g0409 1013 Pfam Leucine Rich repeats (2 copies) 138 172 IPR025875 -
HCH14g0409 1013 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 334 619 - -
HCH14g0409 1013 Gene3D Ribonuclease Inhibitor 22 216 IPR032675 -
HCH14g0409 1013 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 20 82 - -
HCH14g0409 1013 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 768 978 - -
HCH14g0409 1013 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 964 IPR050647 -
HCH14g0409 1013 MobiDBLite consensus disorder prediction 965 1013 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0741 HCH-Chr11:36103677 HCH14g0409 HCH-Chr14:33102975 8.90E-23 dispersed
HCH14g0409 HCH-Chr14:33102975 HCH6g1438 HCH-Chr6:48138116 2.80E-85 dispersed
HCH9g1093 HCH-Chr9:12976456 HCH14g0409 HCH-Chr14:33102975 2.80E-52 dispersed
HCH14g0408 HCH-Chr14:33088540 HCH14g0409 HCH-Chr14:33102975 1.20E-16 tandem
HCH11g0820 HCH-Chr11:38634970 HCH14g0409 HCH-Chr14:33102975 3.90E-143 transposed
HCH12g0112 HCH-Chr12:596364 HCH14g0409 HCH-Chr14:33102975 1.30E-132 transposed
HCH14g1204 HCH-Chr14:38644274 HCH14g0409 HCH-Chr14:33102975 7.90E-149 transposed
HCH5g0129 HCH-Chr5:773621 HCH14g0409 HCH-Chr14:33102975 2.50E-89 transposed
HCH7g1395 HCH-Chr7:46713701 HCH14g0409 HCH-Chr14:33102975 6.30E-78 transposed
HCH12g0725 HCH-Chr12:4598042 HCH14g0409 HCH-Chr14:33102975 8.90E-76 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81231 PF07714 PK_Tyr_Ser-Thr 2.50E-46 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0409 - - - 0.0