Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0432 ATGGGAAAATCTCCAGACCAGGAACACCCCAAGAAGGCCTTTGGATATGCTGCTAGAGATACCTCTGGCTTTCTTGCTCCCTTCAATTTCTCCAGAAGAGAAACAGGAGAGAAAGACGTGGCATTTAAAATATTGTATTGTGGGATTTGTCATTCTGATATTCATGTGGCGAAAAACGAGTGGGGTAACACTATTTACCCGATTGTTGTTGGGCATGAAATGGTGGGGGAGGTAACGGAGATAGGAAGCAAAGTAGAAAAGGTAAAGATCGGAGACAGAGTTGGCGTAGGATGTTTGGTCGGATCATGCCACTCATGCAACGAATGTTCCAATCACCTCGAGAATTACTGCTCCAAAGCTGTCTTCACTTACGGTTCCCATTACTACGACGGAACCCTCACACACGGCGGCTACTGCGATTTCATGGTCGCCGACGAGCATTTCATCATCCGCATTCCCGACACCCTCCCGCTAGAGGTTGCCGCTCCTTTACTCTGCGCTGGCGTCTCCGTTTATAGCCCTTTGAAACATTTTGGCCTCGACAAGCCTGGTCTCCGTATCGGTGTTGTCGGCCTCGGCGGCCTCGGCCATGTCGCGGTTAAATTCGCTAAGGCATTTGGTGTTGAGGTTACTGTCATTAGTAGCTCTCCTGGCAAGAAGGAGGAAGCCATTGGACGTCTTGGTGCTGATGCGTTTTTGCTCGGCAGTGATCAAGATGGAATAAATGCTATCGAGAGAACGTTGGATGGTATCATAGATACTGTCTCTGCCACCCATGCTGTCGCTCCTTTGATGTCTCTTCTGAAACCGAACGGAAAGCTTATTTTGGTCGGTGCACCGGAGAAGCCACTAGAGGTACCGGCATTCTCTCTGATCGCGGGTGGGAAAACGTTGGCTGGAAGTTGCATCGGAGGGCTGAAGGAAACGCAAGAGATGATCGACTTTGCGGCGAAGCACAATATCGCGGCGGACGTTGAGGTTATTCCGATCGACTATGTGAACACTGCCATGGAGCGGATCCTGAAAAATGATGTCAAATACCGTTTTGTCATCGACGTTGCAAACTCATTGAAGGACTCTTAG 1083 49.4 MGKSPDQEHPKKAFGYAARDTSGFLAPFNFSRRETGEKDVAFKILYCGICHSDIHVAKNEWGNTIYPIVVGHEMVGEVTEIGSKVEKVKIGDRVGVGCLVGSCHSCNECSNHLENYCSKAVFTYGSHYYDGTLTHGGYCDFMVADEHFIIRIPDTLPLEVAAPLLCAGVSVYSPLKHFGLDKPGLRIGVVGLGGLGHVAVKFAKAFGVEVTVISSSPGKKEEAIGRLGADAFLLGSDQDGINAIERTLDGIIDTVSATHAVAPLMSLLKPNGKLILVGAPEKPLEVPAFSLIAGGKTLAGSCIGGLKETQEMIDFAAKHNIAADVEVIPIDYVNTAMERILKNDVKYRFVIDVANSLKDS 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 33356119 33358659 + evm.model.ptg000014l.776 HCH14g0432 558335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0432 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
HCH14g0432 360 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
HCH14g0432 360 FunFam Uncharacterized protein 16 166 - -
HCH14g0432 360 SMART PKS_ER_names_mod 17 351 IPR020843 GO:0016491(InterPro)
HCH14g0432 360 Gene3D - 16 353 - -
HCH14g0432 360 SUPERFAMILY GroES-like 21 184 IPR011032 -
HCH14g0432 360 Pfam Alcohol dehydrogenase GroES-like domain 37 154 IPR013154 -
HCH14g0432 360 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER)
HCH14g0432 360 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
HCH14g0432 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
HCH14g0432 360 Gene3D - 167 323 - -
HCH14g0432 360 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
HCH14g0432 360 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0432 HCH-Chr14:33356119 HCH2g0167 HCH-Chr2:12912715 3.50E-139 dispersed
HCH14g0432 HCH-Chr14:33356119 HCH14g0433 HCH-Chr14:33363201 1.80E-183 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0432 K23232 - csv:101222715 564.303