Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0436 ATGGGAACTCAAAGTCAAACAGAGTTCATAGCACAAAAGAAGATGCTTCCTCCTCAACCTGGGAGGTTTCAGGATCGAGAAGATCTCATTACTTATGTTCGTGATTTTGGTGCTGATCAAGGATATGTGGTAACAATTAAGAAGTCTAGGAAAGATAGAAGGGTAATCCTTGGTTGTGACAGAGGAGGTGTGTACCGTAACCGGCGTAAGGTTGATGAGAACCGACGGAAAAGGAAAGCAAGCTCACGCCTTATAAACTGCCCTTTTGAAGCAATTGGTAAAAAGGAAGATGATATTTGGACACTCACCATTAAAAATGGGGACCACAATCATGAGCCCTTAAAAGATATGTCGGAGCATCCTTATAGTCGCCGTTTTACTGAGGATGAGGTAAGGCAAATAAAGCTGATGACTGAAGCTGGTGTAAAACCACGTCAAGTGCTTAAAGCTCTCAAGCAACATAATCCAGAGCTGCAGTCAACGCCAAGGCATTTGTACAATCTCAAAGCCAAAATTCGCCAAGGAAATCTCTCAGAGAAAAGTATCAAGGCATGGAGACCTAATATATCAGTCTCTGCAAATAATAGTCATACTTTCATTGGGGATTCAGTCGAGAAAAACTTGCTGATGAAGCTTCCTAATTTTATTGGAGGGGAATTTTTGGATTCGCACAATTGTTCAATGGTTGATGTCATTAATCCTGCGACACAAGAAGTTGTTTCTCAAGTTCCTTTAACAACCTATGAAGAGTTTAAGGCCGCAGTCAGTGCAGCCAAACAAGCTTTTCCCCTATGGAAAAACACGCCGATTTCCACTCGTCGACGTATTATGTTCAAATTCCAGGAACTCATCCTCAGAGATCTTGATAAACTCGCGATGAATATTGTGACAGAACAGGGAAAAACGTTAAAGGGTGCTCAAGGTGATGTGCTCCGTGGTTTAGAGGTCGTTGAACATACTTGTGGATTGGCCACCATGCAAATGGGGGAGTTCATCCCTAATGCATCTGATGGAATTGACACGTACTGCCTTAGAGAACCATTAGGTGTTTGTGCTGGAATATGCGCTTTTAACTCTCTGGCAACAATTTCTTTATGGATGTTTCCGGTTGCAGTTACATGTGGCAACACATTTGTTCTTAAGCCATGCGAGAAGAACCCAGGAGTTTCAATGTTACTAGCTGCACTAGCGGTTGAGGCTGGTTTACCTGATGGTGTTCTGAATATTGTCCATGGAACTCATGATATCATTAACTACATATGCGATGATGAGGACATAAAAGCTGTATCCTTCGCCGGTTCTAATTCAGTAGGAACGGACGTATATGCTAGGGCAGCTGCTGCTGGGAAACAAGTTCAGTCCAATACAGGAGGGAAGAACTATGCAATCATTATGCCTGATGCTAATATGGAGGCTAGTTTAAGTGCTCTCATTGCTGCTGGTTTTGGTGCTGCGGAACAGAGGTGTATGGCTCTGAGCACTGTTGTTTCTATTGGCAGTTCAATTCCGTGGGAAGAAAAAGTCGTGGAATATGCCAAAGTACTTAAAGTGGATGTGGGAACAGATCCGAATGCTGACCTTGGTCCTGTCATTACAAAAGAGGTGAAGGATCGTTTATGCAGATTAGTTCACAGTAGCGTTGAAAGTGGTGCTAGACTTCTGCTTGATGGAAGAGACATTGTGGTTCCAGGGTATGAAAATGGAAATTTCATTGGTCCTACTATTTTATCCGATGTAACAACTGACATGGAGTGCTATAAGGAAGAGTTTTTGGGACCGGTTCTCCTTTTCATGCAGGTTGACAACCTAGAGGAGGCTATATCCCTTGTAAACAGAAACAAGAATAAAATTGGAGCGTCCATATTCACAACCTCTAGCATGCACGCGAGGAAATTCCAGAGTGAAGTGGAAGTGGGAATGGTTGGTATCAATGTTGCTGTTCCAGTTCCTTTACCATCTTCTTCCTTTAATGATAAGGCTGGCCTGGAATTTTACACCCAATTGAAAAGAGTGGCACAACAGTGTAAGAATTTTCCAAGCATTGGAGTGTCACTGGCAGTGCCTTCATCATCTGAGACAGATTTGAGGGCCCAAGGAGTACCTTGGATGTTTACTTCAACATCTGGGCAGATAATTTTACCCCCCTTGCCTTCAGCATCCGAGAGGGATTCGCCTGGCATCGGTGTGCTGCACTCGAACCCTCCATTATCGGAGATAGATTTAACCAACCAAAGAGCTACCTCGTCATCTCCATCCCCTTCTCCATCTCCTGATAGGGGTTTGTCAACCTATGATAGTCTTAGTCTGATGACTCATGGACATGACAGTATAGTTCCGTCTTGTACAATTGACAGCTCATCAGAACGGTTATACATGCTAGCAACTTCCCATCTGAATGACAGTATTAGTCAAACATTGCAGAGGACAGATACCTCCGTGTTTTCTTCCGAGAGGCTTTATATGCCTCCAACGTCTCAAAGAAATGACCACATCGGCTTGGCTTCTCAGACCAATATTGCTTTGGAATCAACTTCAGATAGAATATACTTGTCTAGTACATCTCAGAGGGATGATAATATGGCATCTGCCACTTCTCAACAGGCTGAAACTTTGGCATCTACTTCAGAGAGAATATATATACCTCCATTGGTTCATAGAAATGCAGGTATAGCACCAAAATCTGAATGGTTGTGCGTTCCCACTTCCGCTGCATCTCAGAGGATGTATCCTCGAGGTCCGATTATTTCAGCAGATGAATATCCAAGCCAAGGGGCATCGTTGACATTGCCTTCATCCCAGAGAATATAA 2808 43.23 MGTQSQTEFIAQKKMLPPQPGRFQDREDLITYVRDFGADQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKVDENRRKRKASSRLINCPFEAIGKKEDDIWTLTIKNGDHNHEPLKDMSEHPYSRRFTEDEVRQIKLMTEAGVKPRQVLKALKQHNPELQSTPRHLYNLKAKIRQGNLSEKSIKAWRPNISVSANNSHTFIGDSVEKNLLMKLPNFIGGEFLDSHNCSMVDVINPATQEVVSQVPLTTYEEFKAAVSAAKQAFPLWKNTPISTRRRIMFKFQELILRDLDKLAMNIVTEQGKTLKGAQGDVLRGLEVVEHTCGLATMQMGEFIPNASDGIDTYCLREPLGVCAGICAFNSLATISLWMFPVAVTCGNTFVLKPCEKNPGVSMLLAALAVEAGLPDGVLNIVHGTHDIINYICDDEDIKAVSFAGSNSVGTDVYARAAAAGKQVQSNTGGKNYAIIMPDANMEASLSALIAAGFGAAEQRCMALSTVVSIGSSIPWEEKVVEYAKVLKVDVGTDPNADLGPVITKEVKDRLCRLVHSSVESGARLLLDGRDIVVPGYENGNFIGPTILSDVTTDMECYKEEFLGPVLLFMQVDNLEEAISLVNRNKNKIGASIFTTSSMHARKFQSEVEVGMVGINVAVPVPLPSSSFNDKAGLEFYTQLKRVAQQCKNFPSIGVSLAVPSSSETDLRAQGVPWMFTSTSGQIILPPLPSASERDSPGIGVLHSNPPLSEIDLTNQRATSSSPSPSPSPDRGLSTYDSLSLMTHGHDSIVPSCTIDSSSERLYMLATSHLNDSISQTLQRTDTSVFSSERLYMPPTSQRNDHIGLASQTNIALESTSDRIYLSSTSQRDDNMASATSQQAETLASTSERIYIPPLVHRNAGIAPKSEWLCVPTSAASQRMYPRGPIISADEYPSQGASLTLPSSQRI 935
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 33397735 33416520 + evm.model.ptg000014l.772 HCH14g0436 558339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0436 935 MobiDBLite consensus disorder prediction 713 765 - -
HCH14g0436 935 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 15 689 IPR010061 GO:0004491(InterPro)|GO:0004491(PANTHER)|GO:0005739(PANTHER)|GO:0006210(PANTHER)|GO:0006574(PANTHER)|GO:0018478(PANTHER)
HCH14g0436 935 MobiDBLite consensus disorder prediction 921 935 - -
HCH14g0436 935 MobiDBLite consensus disorder prediction 736 765 - -
HCH14g0436 935 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 231 456 IPR016162 GO:0016491(InterPro)
HCH14g0436 935 CDD ALDH_F6_MMSDH 212 674 IPR010061 GO:0004491(InterPro)
HCH14g0436 935 Pfam Transcription factor AFT 23 112 IPR014842 GO:0000981(InterPro)|GO:0010106(InterPro)|GO:0045944(InterPro)
HCH14g0436 935 Pfam Aldehyde dehydrogenase family 222 651 IPR015590 GO:0016491(InterPro)
HCH14g0436 935 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 216 463 - -
HCH14g0436 935 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 457 655 IPR016163 GO:0016620(InterPro)
HCH14g0436 935 MobiDBLite consensus disorder prediction 915 935 - -
HCH14g0436 935 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 457 657 - -
HCH14g0436 935 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 214 659 IPR010061 GO:0004491(InterPro)
HCH14g0436 935 SUPERFAMILY ALDH-like 207 675 IPR016161 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0436 HCH-Chr14:33397735 HCH7g0813 HCH-Chr7:15804548 1.20E-191 dispersed
HCH14g0436 HCH-Chr14:33397735 HCH4g0009 HCH-Chr4:88079 1.00E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0436 K00140 - csv:101207178 1219.14