Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0519 ATGGCGGGACACACAGATTCTTCCCCTCTTATTTCACCACCACCGATCACTGAGCCTTGTGAAATCGATCTCGAAGCCGGCCATTCCGAGCAAATTCAATGTAGAATTTGCCTCGAAACTGATGGTAGGGATTTTATTGCTCCTTGCAACTGTAAAGGAACATCAAAGTATGTTCATCGAGAATGTTTGGATCATTGGCGATCTGTGAAGGAAGGGTTTGCTTTTGCTCATTGTACCACCTGTAAGGCCCCTTACCATTTGAGAGTACACACTGTTGCTGATAGGAAATGGCGAACCCTGAAGTTTCGATTTTTCGTGACTAGAGACATTCTATTTATATTTTTGGCAGTTCAGCTTGTGATTGCTTCTCTGGGATATTTGATGTATTTTGTAGATGGTTTTCAACATTACTGGCTTCGTCTAGCATGGGGTTTCAATAACGAAATTAGTTTTTATTACTTATGTGGAGCCTTATTATTTTTTGCCTTGCTTGGCTTATCTGGATGCTTTATCACTTGTTATGATCGGAGAGTTAGGAATGATTTGGCTCAGCCGTGTCGAGAATTATGTCTTTGTTGCTGTCACCCTGGACTTTGTGCAGACTGTCATTTACCTGGTACTCTTTGTATGTGGACTGACTGTACCACCTGCTTTGAAAGTTGTGGGAGTATGGCAACCGAATCTGGATGTCTTGGAGGTGCTGGTGAAGCAGGACTACCATTGTTATTTATAACGGTATTGATTGTTATTGGTCTGTTTACAGTGATTGGGATATTCTACAGTGTTTTGGTGGCTACCATGGTTGGACAACGAATTTGGCAACGACACTATCACATACTTGCAAAAAGAATGCTAACAAAAGAATATGTTGTGGAAGATGTAGATGGCGAGATGACAGGATCCGATTGGTTGCCTCCGCCGCTTCCAGCAGAGCATGTTCAACAGCTGAAAACTCTTGGTCTCCTATGA 969 42.31 MAGHTDSSPLISPPPITEPCEIDLEAGHSEQIQCRICLETDGRDFIAPCNCKGTSKYVHRECLDHWRSVKEGFAFAHCTTCKAPYHLRVHTVADRKWRTLKFRFFVTRDILFIFLAVQLVIASLGYLMYFVDGFQHYWLRLAWGFNNEISFYYLCGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELCLCCCHPGLCADCHLPGTLCMWTDCTTCFESCGSMATESGCLGGAGEAGLPLLFITVLIVIGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSDWLPPPLPAEHVQQLKTLGLL 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 34113263 34117451 - evm.model.ptg000014l.689 HCH14g0519 558422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0519 322 Pfam RING-variant domain 34 81 IPR011016 GO:0008270(InterPro)
HCH14g0519 322 ProSiteProfiles Zinc finger RING-CH-type profile. 26 88 IPR011016 GO:0008270(InterPro)
HCH14g0519 322 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 15 321 - -
HCH14g0519 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 95 IPR013083 -
HCH14g0519 322 SMART ringv_2 33 82 IPR011016 GO:0008270(InterPro)
HCH14g0519 322 CDD RING_CH-C4HC3_MARCH 34 82 - -
HCH14g0519 322 SUPERFAMILY RING/U-box 29 86 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0519 HCH-Chr14:34113263 HCH8g0799 HCH-Chr8:44576173 5.30E-54 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0519 - - - 0.0