Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH14g0542 | ATGACCGGCGGTGGCTCATCAGGAAGAACGCCGACGTGGAAAGAGAGAGAAAACAATAAAAGAAGAGAGAGAAGAAGGAGAGCCATTGCTGCGAAGATCTACACTGGTCTTAGAGCTCAAGGAAATTATAAACTTCCTAAACACTGTGATAATAATGAAGTCTTGAAAGCTCTCTGTAATGAAGCTGGTTGGATTGTCGAAGAAGATGGTACTACCTATCGTAAGGGATGTAAGCCACCGATTAATGAAATTGGGAATTCAGGAAATATGAGTGCTTGTTCTTCTCTTCAACCAAGTCCACAATCTTCATGTTTCCCCAGTCCTGTTCCCTCTTACCATGCGAGTCCTACTTCGTCTTCATTTCCGAGCCCGACTCGATTCGATGCGAATCCGTCTTCTTATCTTCTGCCTTTCCTTCAGAATATATCTTCAATTCCTGCTAATTTGCCTCCTCTTAGGATATCGAATAGTGCACCTGTTACCCCGCCTCTTTCTTCCCCGACTTCCAGGGGTTCGAAGCGGAAGCCTGATTGGGAGTCGATTTCCAATAGCTACTTGGCCTCGTTCCGTCATCCTCTGTTTGCTGCTTCTGCTCCTTCGAGCCCTACGCGGCGTTATAATCTTACACCGGCCACGATTCCCGAATGTGATGAGTCGGATGCTTCGACTGTGGATTCTGGTCGATGGGTTAGTTTTCAGACGGTGGCGCCTTCTGTGGCTCCTCCTTCCCCTACCTTTAATTTGATGAAGCCTGTGAATCAGCTGAATTCTCTTCATGATGCTGTTGGTGGACATGGAGGGATGGGGTGGGTTACGGCTTCTGATAAAGGACATGGCTCGGAGTTTGAATTTGAGAGTGGTAGAGTGAAGCCGTGGGAGGGTGAAAGAATTCATGAAGTTGGTGTAGAGGATCTGGAGCTTACGCTTGGGAGTGGGAGTGGGAGTGGGAAGATCCGTGGTTAA | 963 | 47.66 | MTGGGSSGRTPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCNEAGWIVEEDGTTYRKGCKPPINEIGNSGNMSACSSLQPSPQSSCFPSPVPSYHASPTSSSFPSPTRFDANPSSYLLPFLQNISSIPANLPPLRISNSAPVTPPLSSPTSRGSKRKPDWESISNSYLASFRHPLFAASAPSSPTRRYNLTPATIPECDESDASTVDSGRWVSFQTVAPSVAPPSPTFNLMKPVNQLNSLHDAVGGHGGMGWVTASDKGHGSEFEFESGRVKPWEGERIHEVGVEDLELTLGSGSGSGKIRG | 320 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 34338236 | 34339408 | + | evm.model.ptg000014l.666 | HCH14g0542 | 558445 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH14g0542 | 320 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
HCH14g0542 | 320 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 6 | 313 | IPR033264 | GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro) | |
HCH14g0542 | 320 | MobiDBLite | consensus disorder prediction | 155 | 171 | - | - | |
HCH14g0542 | 320 | MobiDBLite | consensus disorder prediction | 155 | 177 | - | - | |
HCH14g0542 | 320 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 6 | 129 | IPR008540 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH3g0734 | HCH-Chr3:5279590 | HCH14g0542 | HCH-Chr14:34338236 | 5.20E-49 | transposed | |
HCH6g0624 | HCH-Chr6:37496919 | HCH14g0542 | HCH-Chr14:34338236 | 1.70E-47 | transposed | |
HCH14g0542 | HCH-Chr14:34338236 | HCH4g0706 | HCH-Chr4:4591031 | 2.20E-76 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
32948 | PF05687 | BES1_N | 2.80E-64 | No_clan | HCH | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH14g0542 | K14503 | - | csv:101216171 | 509.605 |