Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0551 ATGGAGGAAAATGTGGGCCAGGGTTGCTCAGATGAAGAACATTCTTATTTCAAGACAGTCAGTGAAGCTCTTAGTTGGTTTAGTTTAAATGATGATTCTGAAGATTTGAGTTCTGATTTCGTCTTCAAGATTGAATCTTGTTTGCTCATTGACCCTCTTTCTCTCAAGATTGGTAAAGTCATTGGTGAAGGTTCTTGCTCCATTGTCTATCAAGGATTGTATGATTCTCGGCTTGTCGCCGTGAAGATTATACAAACGAGAAGAACAGCAGCTATAAGTCCTGAAAAAAAGGAAAGGTTTCAGAGAGAAGTTGTAATGTTGTCAAGGGTGAATCATGAGAACGTTATCCAGTTCATTGGCGCTTCTCTAGAACCAACACTGATGATAATCACTGAGCTCATGAGAGGTGGTACCCTTCAAAAATACTTGTGGAACACCCGTCCAGACACGCTAGATCCGAAGATTTCCTTGAGTTTTGCTCTAGATCTATCAAGAGGGATGGAATACTTGCATGGAAACGGCATCATGCATCGGGACTTGAAGCCAAGCAACCTACTGCTGACAGAAGATAAGAAACAAGTTAAACTGGCTGACTTTGGGTTAGCTAGAGAGGAGATATCTGGTGAAATGACTACTGAGGCAGGCACTTACCGTTGGATGGCCCCTGAGTTATTCAGCATTGATCCATTGCCAATTGGAGCTAAGAAATGCTATGACCATAAGGCAGATGTCTATAGCTTCTCAATAATTCTTTGGGAATTGCTGACAAACAAGACTCCATTCAAGGGCAGAAATAGTGTTATGGTAGCATATGCCACAGCTAAGAATGTAAGGCCTAGTTTGGAGGAAATCCCAGAAGATATCGTCTCTTTGTTGCAGTCATGTTGGGCCGAGGATCCGAATGTCCGTCCCGAGTTTACGGAGATAACAAGCTCTCTTTCTAATCTACTTCAGTTTAGAGAATCTGCAGACGATCCTGAGGTAGATGATGAGACAGAAGAGGTCAATTTTGCATCAGACATACCCTCCTCTACTACAAGTAACAGAGAGCACAATGCTGGAAAGCATAAAAATTCTCCATCCTGCTTCATCTGCTTCTGTAACAACTGCCCGTCTGATTGA 1122 42.42 MEENVGQGCSDEEHSYFKTVSEALSWFSLNDDSEDLSSDFVFKIESCLLIDPLSLKIGKVIGEGSCSIVYQGLYDSRLVAVKIIQTRRTAAISPEKKERFQREVVMLSRVNHENVIQFIGASLEPTLMIITELMRGGTLQKYLWNTRPDTLDPKISLSFALDLSRGMEYLHGNGIMHRDLKPSNLLLTEDKKQVKLADFGLAREEISGEMTTEAGTYRWMAPELFSIDPLPIGAKKCYDHKADVYSFSIILWELLTNKTPFKGRNSVMVAYATAKNVRPSLEEIPEDIVSLLQSCWAEDPNVRPEFTEITSSLSNLLQFRESADDPEVDDETEEVNFASDIPSSTTSNREHNAGKHKNSPSCFICFCNNCPSD 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 34471222 34474228 + evm.model.ptg000014l.657 HCH14g0551 558454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0551 373 PRINTS Tyrosine kinase catalytic domain signature 169 187 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0551 373 PRINTS Tyrosine kinase catalytic domain signature 284 306 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0551 373 PRINTS Tyrosine kinase catalytic domain signature 131 144 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0551 373 PRINTS Tyrosine kinase catalytic domain signature 242 264 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0551 373 CDD STKc_MAP3K-like 61 313 - -
HCH14g0551 373 Gene3D Transferase(Phosphotransferase) domain 1 38 349 - -
HCH14g0551 373 Pfam Protein kinase domain 57 311 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0551 373 SMART serkin_6 55 317 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0551 373 ProSiteProfiles Protein kinase domain profile. 55 317 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0551 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0551 373 SUPERFAMILY Protein kinase-like (PK-like) 55 326 IPR011009 -
HCH14g0551 373 PANTHER SERINE-THREONINE PROTEIN KINASE 49 317 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
HCH14g0551 373 MobiDBLite consensus disorder prediction 323 358 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH13g0856 HCH-Chr13:9061632 HCH14g0551 HCH-Chr14:34471222 3.30E-73 dispersed
HCH14g0551 HCH-Chr14:34471222 HCH9g0113 HCH-Chr9:592760 8.60E-80 dispersed
HCH14g0551 HCH-Chr14:34471222 HCH8g1427 HCH-Chr8:48871440 7.80E-81 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81235 PF07714 PK_Tyr_Ser-Thr 5.10E-56 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0551 - - - 0.0