Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH14g0552 | ATGGGGACAGGAGAAGAGAGCACGCCTTCTAAAACTTCCAAGCCTGCCTCTTCATCTCATGACATACCGACAACGCCTTCATATTCTGATTGGTCAAGCTCAATGCAGGCTTATTACGGTGCTGGTGCTACTCCGCCTCCGTTTTTTGCATCTACAGTTGCCTCTCCAGCTCCCCACCCTTACCTCTGGGGAGGCCAGCATCCTTTTGTTCCACCGTATGGGACACCGGTACCTTACCCAGCTATGTATCCTCCTGGAGGAGTTTATGCACATCCTAGTATGACCATGACTCCTGGCTCTGTACCGGTAACCATGGAATATGAAAGAAAATCTCCTGACGGAAAAGAAAGGCCCTCAAAAAAAACCAAGGGAACTTCTGGGAATACTGGCTCAGGTGGTGGTAGGACTGGGGACAGTGGAAAGGTGGCTTCAAGTTCTGGAAATGATGGTGCTTCTCAAAGTGCTGAAAGCGGCACCGAGGGTTCATCAGAATGTAGTGATGAGCAACAGGAATTTTCTGCAAGTAAGAAGGGAAGCTTTAACCAGATGCTGGCAGATGGGGCCAACGCACAAAGCAATACCGGTGGACCGAACGGTAAATCTTCAGTGACAGGAAAACCAGTTGCGTCCATGCCTGCAGCTAGTCTGAATATGGGAATGGACTTATGGAACACATCCTCTGGTGCCTCGGGGGCTGCAAAGGTGAGAGCCAACGCACCTGCTGTCTCCTCAGCTGTCGTTCCAGCAATGATTGGCCGTGATGGTGTAATGCCCGAACCATGGGTTCAGGATGAACGTGAACTAAAAAGACAGAAAAGAAAGCAATCTAACCGAGAGTCAGCCAGGAGATCAAGATTACGCAAGCAGGCGGAGTGTGAAGATTTACAAGCGAGAGTGCAGACATTGAACAATGAGAACCGCACTCTTAGGGATGAGCTGCAGAGGCTCTCTGAGGAATGCGAGAAGTTAACTTCAGAAAATAGTTCCATCAAGGAAGACTTGACACGATTTTGTGGACCGGAGGCATTAGCTAACCTTGAGAAATGCAGTGGTGCTGCTGCAACAGTTCCCCAGTCTCGTGGCGGTGAGAGTAACAACTAA | 1101 | 49.59 | MGTGEESTPSKTSKPASSSHDIPTTPSYSDWSSSMQAYYGAGATPPPFFASTVASPAPHPYLWGGQHPFVPPYGTPVPYPAMYPPGGVYAHPSMTMTPGSVPVTMEYERKSPDGKERPSKKTKGTSGNTGSGGGRTGDSGKVASSSGNDGASQSAESGTEGSSECSDEQQEFSASKKGSFNQMLADGANAQSNTGGPNGKSSVTGKPVASMPAASLNMGMDLWNTSSGASGAAKVRANAPAVSSAVVPAMIGRDGVMPEPWVQDERELKRQKRKQSNRESARRSRLRKQAECEDLQARVQTLNNENRTLRDELQRLSEECEKLTSENSSIKEDLTRFCGPEALANLEKCSGAAATVPQSRGGESNN | 366 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 34477955 | 34480425 | + | evm.model.ptg000014l.656 | HCH14g0552 | 558455 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH14g0552 | 366 | MobiDBLite | consensus disorder prediction | 108 | 122 | - | - | |
HCH14g0552 | 366 | SMART | brlzneu | 265 | 329 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0552 | 366 | MobiDBLite | consensus disorder prediction | 255 | 290 | - | - | |
HCH14g0552 | 366 | Pfam | bZIP transcription factor | 265 | 327 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0552 | 366 | Coils | Coil | 278 | 333 | - | - | |
HCH14g0552 | 366 | MobiDBLite | consensus disorder prediction | 123 | 205 | - | - | |
HCH14g0552 | 366 | FunFam | BZIP transcription factor | 267 | 318 | - | - | |
HCH14g0552 | 366 | PRINTS | cAMP response element binding (CREB) protein signature | 215 | 230 | - | - | |
HCH14g0552 | 366 | PRINTS | cAMP response element binding (CREB) protein signature | 282 | 302 | - | - | |
HCH14g0552 | 366 | PRINTS | cAMP response element binding (CREB) protein signature | 264 | 280 | - | - | |
HCH14g0552 | 366 | PRINTS | cAMP response element binding (CREB) protein signature | 302 | 319 | - | - | |
HCH14g0552 | 366 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
HCH14g0552 | 366 | MobiDBLite | consensus disorder prediction | 104 | 209 | - | - | |
HCH14g0552 | 366 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 15 | 360 | IPR044827 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0043565(InterPro)|GO:0043565(PANTHER) | |
HCH14g0552 | 366 | CDD | bZIP_plant_GBF1 | 270 | 320 | IPR045314 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0552 | 366 | MobiDBLite | consensus disorder prediction | 219 | 238 | - | - | |
HCH14g0552 | 366 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 267 | 330 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0552 | 366 | SUPERFAMILY | Leucine zipper domain | 268 | 324 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0552 | 366 | Gene3D | - | 268 | 325 | - | - | |
HCH14g0552 | 366 | Pfam | G-box binding protein MFMR | 1 | 94 | IPR012900 | - | |
HCH14g0552 | 366 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 272 | 287 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0552 | 366 | MobiDBLite | consensus disorder prediction | 259 | 274 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH14g0552 | HCH-Chr14:34477955 | HCH7g1676 | HCH-Chr7:48729875 | 4.80E-27 | dispersed | |
HCH14g0552 | HCH-Chr14:34477955 | HCH6g1143 | HCH-Chr6:45998276 | 1.10E-31 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
32950 | PF07777 | MFMR | 7.60E-32 | No_clan | HCH | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH14g0552 | K09060 | - | csv:101217128 | 576.244 |