Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0610 ATGACTCAGTTTGTGAGCTTTGTTTTGGTCATTTCCCTTCTTGCATTTGCTCCACCTTGTCTCTCTAGCTGGACTGGTGGGAATCTATACCCTCAGTATTATGATCGATCATGTCCAATAGCTAAAGAGATAGTTAAGTCCATTGTGGCAAAAGCGTTTGCACGAGAAGCCCGTATCGCGGCCTCGATCCTTAGACTTCACTTCCATGATTGTTTTGTTCAGGGCTGTGATGCATCTTTACTATTGGATAGCAGTGGGAGCATCAACAGTGAAAAGAATTCCAATCCAAACAAGAATTCAGCAAGAGGGTTTGAGGTGATTGATGAGATCAAATCTGCACTTGAGAGAGAGTGCCCTCAAACTGTATCTTGTGCTGATATCTTGACTTTGGCTGCAAGAGACTCCACTGTCATTACCGGAGGCCCCTACTGGGAGGTTCCATTGGGAAGGAGGGACTCAAGAACTGCAAGCCTGAGTGGCTCCAACAACAACATTCCTGCACCAAACAATACATTCCAAACCATTCTCTCAAGATTCCAAAGGCAGGGGCTTGACAATACTGATCTTGTTGCATTGTCTGGAGGACACACCATCGGAAATTCCAGGTGCACCAGTTTCAGGCAAAGATTATACAATCAAAACGGCAACGGCCAGCCAGACAAAACCCTTCAGCCGTCTTACGCCGCCGAGCTCCGAAGCCGGTGCCCAAGATCCGGCGGCGACCAGAACCTCTTTTTCCTCGACTACGTAAGCCCGACCAAATTCGACAACAGCTACTTCAAGAACATAGTAGCTTCCAAAGGGCTCCTTAATTCCGACCAAGTTCTTCTGACCGGAAACGGTGCTTCGGCTGCTTTGGTGAAGAAATATGCGGAAGATAACGAGGCTTTCTTCGAGCAATTCGCTAAATCTATGATTAAAATGGGTAATATTTCACCGTTGATTGGCTCGAGCGGAGAGATTAGGAAGACTTGTCGGAAGATTAATAATTAG 993 46.42 MTQFVSFVLVISLLAFAPPCLSSWTGGNLYPQYYDRSCPIAKEIVKSIVAKAFAREARIAASILRLHFHDCFVQGCDASLLLDSSGSINSEKNSNPNKNSARGFEVIDEIKSALERECPQTVSCADILTLAARDSTVITGGPYWEVPLGRRDSRTASLSGSNNNIPAPNNTFQTILSRFQRQGLDNTDLVALSGGHTIGNSRCTSFRQRLYNQNGNGQPDKTLQPSYAAELRSRCPRSGGDQNLFFLDYVSPTKFDNSYFKNIVASKGLLNSDQVLLTGNGASAALVKKYAEDNEAFFEQFAKSMIKMGNISPLIGSSGEIRKTCRKINN 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 34853882 34855592 + evm.model.ptg000014l.598 HCH14g0610 558513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0610 330 PANTHER PEROXIDASE 72-RELATED 8 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 SUPERFAMILY Heme-dependent peroxidases 29 329 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601(InterPro)
HCH14g0610 330 FunFam Peroxidase 166 308 - -
HCH14g0610 330 ProSiteProfiles Plant heme peroxidase family profile. 28 329 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 FunFam Peroxidase 32 174 - -
HCH14g0610 330 Gene3D - 33 329 - -
HCH14g0610 330 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
HCH14g0610 330 Pfam Peroxidase 45 293 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0610 330 CDD secretory_peroxidase 28 328 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
HCH14g0610 330 Gene3D Peroxidase, domain 2 166 309 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0610 HCH-Chr14:34853882 HCH5g0300 HCH-Chr5:1873911 4.90E-87 dispersed
HCH3g0537 HCH-Chr3:3544201 HCH14g0610 HCH-Chr14:34853882 1.40E-52 dispersed
HCH9g0600 HCH-Chr9:4028422 HCH14g0610 HCH-Chr14:34853882 1.80E-52 dispersed
HCH13g1220 HCH-Chr13:39707400 HCH14g0610 HCH-Chr14:34853882 1.20E-74 transposed
HCH6g1760 HCH-Chr6:50057948 HCH14g0610 HCH-Chr14:34853882 1.90E-78 transposed
HCH13g1387 HCH-Chr13:41797116 HCH14g0610 HCH-Chr14:34853882 3.10E-145 wgd
HCH14g0610 HCH-Chr14:34853882 HCH4g0752 HCH-Chr4:4843382 8.60E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0610 K00430 - csv:101204648 564.303