Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH14g0614 | ATGGAGATTGTTATGGGATTCTGGTTTTGGTTTGCAAGTATCATTCTGGTTTGGTTTTGGTTTCATAAGAAGATAGAAGAAAAGAAGGGCTGCCGTGGAATTCCAAAAGGAAACTTGGGTTGGCCTCTCATTGGAGAAACTCTCGACTTCATTGCTTGTGGCTACACCTCTCGTCCTGTTAGCTTCATGGATAAACGCAAAGCTCTGTATGGGAATGTGTTTAAGACAAACATATTGGGAACAGCAATCATAGTATCCACTGATTCAGAAGTAAACAAGATTGTTTTACAAAACCATGGAAATGTTTTCATCCCAGCTTACCCAAAATCAATATCAGAATTACTTGGTCCATTTTCAATCCTTCAGATGAATGGTAATATTCAAAAAAGAGTCCATTCAATCATTGGAAGCTTCCTTAGGTCCCCACAATTCAAAGCCAGAATCACTTCTGATATTCAGAACACAGTTAAACACAATCTTTCTAATTGGAACACCAGTCCCAGTTTTGTTTATGTTCAAACTCAAACCAAACAGATCACATTTGAAGTTCTAGTGAAGGTTTTAATGAGTGTGGGCCCAGGTGAAGATTTGCAAATTTTGAAAAGGGAGTTTGAAGAATTCATCAAAGGCTTGATTTGTTTACCAATTAAGTTTCCTGGCACAAGACTTTATAAATCATTAAAGGCTAGAGAGAAGTTGATAAAAATAGTGACAAAAATAGTAGGAGAGAGAAAAACAGCAATGGAAACGGCAAGTAAACAGAATATTCCTGTTGTTAAGGATGCAATGGAAGTGCTGTTGCAAGATAACGGAGAAGCAAACGGCGACGGGCAACGGCTGCCGTTAGATTTCATAAGCAGTCATATGATAGAGCTGATGATTCCCGGCGAAGAGACGGTTCCGATGTCGATGACACTTGCTGTGAAATTTCTAAGTGACAGCCCGGTCGCTTTAGACCGAATAATGGTGGAGAATATGGAACTGAAGAAGCAGAAAGAGAGTTCTGGTGAGGAGTATACTTGGACTGATTACATGTCTCTGCAATTTACTCAAAATGTGATTAGTGAAACGTTAAGAATAGCGAATATCATCAACGGTGTTTGGAGAAAAGCTCAAAAAGATGTTGAAATCAAAGGCTACTTAATACCACAAGGATGGTGCGTTTTAGCATCTTTTATTTCGGTTCACATGGATGAAGAAAACTACACAAACCCTCATCAGTTTGATCCATGGAGATGGGAGAGAATTGGATCTGCAACTAATAACCATAACTTCACTCCTTTTGGAGGGGGACAGAGGCTATGTCCCGGTATCGAACTCACCAGGCTCGAAATCTCAATCTTCCTTCATCACCTTGTCACTACATACAAATGGGTAGCTGAAAAGGATGAAATAATCCATTTTCCGACAGTGAAGATGAGAAGGAAGTTGCCAATTACAATCACAACCATAATCTCATGA | 1461 | 39.36 | MEIVMGFWFWFASIILVWFWFHKKIEEKKGCRGIPKGNLGWPLIGETLDFIACGYTSRPVSFMDKRKALYGNVFKTNILGTAIIVSTDSEVNKIVLQNHGNVFIPAYPKSISELLGPFSILQMNGNIQKRVHSIIGSFLRSPQFKARITSDIQNTVKHNLSNWNTSPSFVYVQTQTKQITFEVLVKVLMSVGPGEDLQILKREFEEFIKGLICLPIKFPGTRLYKSLKAREKLIKIVTKIVGERKTAMETASKQNIPVVKDAMEVLLQDNGEANGDGQRLPLDFISSHMIELMIPGEETVPMSMTLAVKFLSDSPVALDRIMVENMELKKQKESSGEEYTWTDYMSLQFTQNVISETLRIANIINGVWRKAQKDVEIKGYLIPQGWCVLASFISVHMDEENYTNPHQFDPWRWERIGSATNNHNFTPFGGGQRLCPGIELTRLEISIFLHHLVTTYKWVAEKDEIIHFPTVKMRRKLPITITTIIS | 486 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 34870399 | 34875207 | - | evm.model.ptg000014l.594 | HCH14g0614 | 558517 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH14g0614 | 486 | PRINTS | E-class P450 group IV signature | 61 | 84 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0614 | 486 | PRINTS | E-class P450 group IV signature | 435 | 453 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0614 | 486 | PRINTS | E-class P450 group IV signature | 347 | 363 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0614 | 486 | PRINTS | E-class P450 group IV signature | 419 | 435 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0614 | 486 | PRINTS | E-class P450 group IV signature | 396 | 414 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0614 | 486 | PANTHER | CYTOCHROME P450 26 | 34 | 460 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| HCH14g0614 | 486 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 23 | 484 | - | - | |
| HCH14g0614 | 486 | Pfam | Cytochrome P450 | 35 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0614 | 486 | PRINTS | P450 superfamily signature | 435 | 446 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0614 | 486 | PRINTS | P450 superfamily signature | 140 | 153 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0614 | 486 | PRINTS | P450 superfamily signature | 352 | 363 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0614 | 486 | PRINTS | P450 superfamily signature | 426 | 435 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0614 | 486 | CDD | CYP90-like | 66 | 482 | - | - | |
| HCH14g0614 | 486 | Gene3D | Cytochrome P450 | 25 | 485 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0614 | 486 | SUPERFAMILY | Cytochrome P450 | 33 | 481 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH14g0614 | 486 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 428 | 437 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH14g0614 | HCH-Chr14:34870399 | HCH6g0114 | HCH-Chr6:1443161 | 4.90E-136 | dispersed | |
| HCH3g1121 | HCH-Chr3:33023845 | HCH14g0614 | HCH-Chr14:34870399 | 3.20E-07 | dispersed | |
| HCH14g0614 | HCH-Chr14:34870399 | HCH4g1474 | HCH-Chr4:11150924 | 1.80E-141 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH14g0614 | K12637 | - | csv:101203911 | 724.546 |