Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0630 ATGAAGTTTTTTATACTATTATTGGCACTCTTATTATCCCAACCCTTCTCTTCTTCTGCCGCCACCAATGCCGATACCTTATCTGAAATTCAAGCCTTAACTTCCTTTAAACTAAATCTTCACGATCCTCTTAATGCCTTATCTGGATGGGATTCTTCAACGCCGTCAGCTCCATGTGATTGGCGTGGCATTTCCTGTAATAATAACAGAGTCACTGAACTCCGTTTGCCACGTCTCCAACTTTCCGGCCAACTATCAGATCAGCTTGCAAACTTACGGTTATTACGTAAACTAAGCATTCGTTCCAATTTCTTTAACGGGTCCATTCCTTCTTCTCTTTCCAAATGCACGTTTCTTCGTGCCATGTTTTTACAATACAATTCGTTTTCTGGCGACCTTCCGCCGGAGTTTGGGAACTTGACGAATCTCCATATCTTAAACGTGGCACAGAACCATCTCTCCGGTGTGATCTCCGGTGGCCTGCCTCGGAGCCTCAAGTATCTCGATCTTTCGTCGAATTCGTTCTCCGGTTCAATACCGAGGAATGTTGTGAATTTGACTCAGGTTCAGGTTGTTAATCTATCGTTTAATAGGTTTTCCGGGGCTATTCCGGCGAGTTTTGGGGAGCTTCAGGAATTGCAATATTTGTGGCTTGATTATAATGTTCTAGAAGGGACTTTGCCTTCTGCTATTGCTAATTGTTCTTCACTTGTTCATTTGAGTGTGGAAGGGAATGGTTTAGAAGGTGTGATTCCTGCTGCCATTGGAGCTCTTCCTAATCTTCAAGTGCTGTCTCTTTCAAAGAATAGGCTTTCTGGGTCAGTTCCTTACTCTATGTTTTGTAATGTATCGACTTTTCCGCCGTCGATTCGGATTGTCGAATTGGGATTTAATGAGTTCACGGATATAGTTAAGCCTCAGTCACAGACAATGACATGTTTTAGTGTTTTGCAAGTTTTGGATATTCAAAACAATAAGATAAAGGGGGAGTTTCCTTTGTGGTTAACGAGTGTTTTGACTTTGAGAATGTTGGATTTTTCAAGTAATGCTTTTCATGGTGTGATTCCAAAGGATATTGGGAGTCTTTTTAGATTGGAAGAATTGAGAATGGCTAATAATTCGTTTAATGGGTTGGTTCCTTCAGAAATCAAGAATTGTGGGTTGCTCTCTGTTTTGGATGTTGAAGGAAATCGATTTTCGGGTGAGATTCCGACGTTTTTGGGTTATATGAAAGAGTTGAAAAGGTTGTCTTTTGGAGGAAATCTTTTTTCTGGGAATGTTCCTGTTAGTTTTGGCAATCTCTTGGACCTTGAATACTTGAACTTGAGGGATAACAAATTGAATGGAGCTATTCCGTTGGAGCTCATGGGACTAAGAAATTTAACTGCAATAGAACTTGGTGGGAATGGATTTTCTGGTGTGATTCCTTCAATTATTGGGAATCTCAGTCACTTGGTGATTTTGAATCTAAGCTCAAACAGCCTTTCTGGGAAAGTTCCATCTAATATCGGAAATCTTTTCAAGCTTACGACTTTGGATTTGAGCAAGCAGAATCTTTCTGGTGAGTTGCCTTTTGAGCTATCTGGTTTGCCTAATTTGCAGGTTATTGCTTTTCAGGAGAACATGTTGTCTGGCAATGTTCCTGAAGGGTTTAGTAGTTTGATGGGTCTGCGCTATTTGAATCTAAGTTCGAATGGATTCTCCGGTCCACTTCCGGCGAATTATGGCTTTCTTCGATCTTTAGTGTCTCTATCATTGTCGAATAATCACATTTCCGGGGTGATCCCTTCAGAACTTGGAAACTGTTCCGATCTCGAAAGTTTGGAGATCCGTTTGAATGCTCTTACAGGTTATATTCCTGCAGATCTTTCTCGCTTATCTCATCTCCAAGAGCTTGATTTGGGTTTGAATAATTTGACGGGTGGAATTCCTGAGGAGATATCTGAGTGTTCGTCTTTGAAAGCGCTTGTTTTAGACTCGAATCAGCTTTCGGGTGAGATACCAAAGTCACTGTCGGAGCTGTTAAATTTAACAATTCTGGACCTCTCTTCCAACCATTTAAGTGGTGTGATTCCTGCTAATCTTAGCAGCATTGCTGGATTGGTGAGCTTCAATGTCTCAAATAATGATCTTGAAGGTGAAATCCCACCGACTTTAGGCTCTCGATTCAATAGCTCATCGGTATTTGCTAACAATTCCGACTTGTGTGGGAGACCATTGGATCGGAATTGTGGGAATAAAGATAAGAAGGATAAGATGAAGAGGTTGATATTGTTCATTGCAGTAGCTGCCAGTGGAGCTTGCCTTCTAACATTATGCTGTTGTTTCTACATTTTCAGTCTCTTAAGGTGGCGGAAGAGGCTGAAAGAGAGGGCATCAGGAGAGAAGAAAACAAGTCCTGCTCGAGTGAGCTCAGCTGCAAGCGGTGGCCGTGGAAGCACTGAAAATGGTGGGCCGAAACTTGTGATGTTCAACAACAAGATTACTCTAGCAGAAACCATCGAAGCAACTCGGCAATTTGATGAAGAAAATGTCCTTAGTAGAACTCGGTATGGACTTGTTTTCAAAGCTTGTTACAATGATGGCATGGTTCTCTCAATCCGCCGCCTCTCAAATGGCTCACTTGATGAAAACATGTTCCGAAAAGAAGCTGAATTACTGGGGAAAGTGAGGCACAGGAACCTGACTGTTCTCCGTGGCTATTATGCCGGCCCACCCGATATGCGCCTACTAGTATATGACTACATGCCCAACGGCAACCTCGCAACTCTCCTCCAGGAAGCCTCTCATCAAGATGGTCATGTTCTGAATTGGCCAATGCGGCATCTCATTGCATTAGGAATCGCACGTGGCCTAGCCTTTCTCCATTCGTCTTCCATTATCCATGGTGATGTGAAGCCGCAAAGTGTTCTCTTCGACGCTGATTTTGAAGCTCATTTATCTGACTTCGGGCTCGACCGTCTAACCGTCACAGCCACAGCTGAGGCATCGACCTCCACCTTAGTGGGAACATTGGGTTATGTAGCACCTGAAGCAGTGTTAACAGGTGAAGCCACAAAGGAATCTGATGTCTATAGCTATGGCATAGTCTTGCTAGAGATTCTCACAGGAAAGAAACCAGTAATGTTCACAGAAGATGAAGACATTGTCAAATGGGTGAAAAAGCAACTCCAAAGAGGCCAAGTTACAGAACTACTAGAACCAGGATTGCTTGAGCTGGATCCTGAATCATCAGAATGGGAAGAGTTTTTACTAGGTGTGAAAGTCGGTTTGCTTTGCACCGCACCGGACCCTCGTGATCGGCCAACAATGTCCGACATTGTCTTCATGCTCGAAGGATGCCGAGTCGGACCCGATATCCCTTCCTCCGCGGATCCCACCTCGCAACCATCACCAGCATAA 3402 43.3 MKFFILLLALLLSQPFSSSAATNADTLSEIQALTSFKLNLHDPLNALSGWDSSTPSAPCDWRGISCNNNRVTELRLPRLQLSGQLSDQLANLRLLRKLSIRSNFFNGSIPSSLSKCTFLRAMFLQYNSFSGDLPPEFGNLTNLHILNVAQNHLSGVISGGLPRSLKYLDLSSNSFSGSIPRNVVNLTQVQVVNLSFNRFSGAIPASFGELQELQYLWLDYNVLEGTLPSAIANCSSLVHLSVEGNGLEGVIPAAIGALPNLQVLSLSKNRLSGSVPYSMFCNVSTFPPSIRIVELGFNEFTDIVKPQSQTMTCFSVLQVLDIQNNKIKGEFPLWLTSVLTLRMLDFSSNAFHGVIPKDIGSLFRLEELRMANNSFNGLVPSEIKNCGLLSVLDVEGNRFSGEIPTFLGYMKELKRLSFGGNLFSGNVPVSFGNLLDLEYLNLRDNKLNGAIPLELMGLRNLTAIELGGNGFSGVIPSIIGNLSHLVILNLSSNSLSGKVPSNIGNLFKLTTLDLSKQNLSGELPFELSGLPNLQVIAFQENMLSGNVPEGFSSLMGLRYLNLSSNGFSGPLPANYGFLRSLVSLSLSNNHISGVIPSELGNCSDLESLEIRLNALTGYIPADLSRLSHLQELDLGLNNLTGGIPEEISECSSLKALVLDSNQLSGEIPKSLSELLNLTILDLSSNHLSGVIPANLSSIAGLVSFNVSNNDLEGEIPPTLGSRFNSSSVFANNSDLCGRPLDRNCGNKDKKDKMKRLILFIAVAASGACLLTLCCCFYIFSLLRWRKRLKERASGEKKTSPARVSSAASGGRGSTENGGPKLVMFNNKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLSNGSLDENMFRKEAELLGKVRHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHSSSIIHGDVKPQSVLFDADFEAHLSDFGLDRLTVTATAEASTSTLVGTLGYVAPEAVLTGEATKESDVYSYGIVLLEILTGKKPVMFTEDEDIVKWVKKQLQRGQVTELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPRDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA 1133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 35005672 35009073 + evm.model.ptg000014l.578 HCH14g0630 558533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0630 1133 Gene3D Phosphorylase Kinase; domain 1 813 915 - -
HCH14g0630 1133 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
HCH14g0630 1133 SMART LRR_typ_2 210 234 IPR003591 -
HCH14g0630 1133 SMART LRR_typ_2 626 650 IPR003591 -
HCH14g0630 1133 SMART LRR_typ_2 578 602 IPR003591 -
HCH14g0630 1133 SMART LRR_typ_2 458 481 IPR003591 -
HCH14g0630 1133 SMART LRR_typ_2 362 385 IPR003591 -
HCH14g0630 1133 SMART LRR_typ_2 530 553 IPR003591 -
HCH14g0630 1133 SMART LRR_typ_2 258 282 IPR003591 -
HCH14g0630 1133 SMART LRR_typ_2 482 506 IPR003591 -
HCH14g0630 1133 SMART LRR_typ_2 674 698 IPR003591 -
HCH14g0630 1133 SMART LRR_typ_2 140 163 IPR003591 -
HCH14g0630 1133 SMART LRR_typ_2 186 209 IPR003591 -
HCH14g0630 1133 Gene3D Ribonuclease Inhibitor 181 283 IPR032675 -
HCH14g0630 1133 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 916 1119 - -
HCH14g0630 1133 Gene3D Ribonuclease Inhibitor 459 753 IPR032675 -
HCH14g0630 1133 Gene3D Ribonuclease Inhibitor 27 180 IPR032675 -
HCH14g0630 1133 Gene3D Transferase(Phosphotransferase) domain 1 916 1119 - -
HCH14g0630 1133 MobiDBLite consensus disorder prediction 798 812 - -
HCH14g0630 1133 Pfam Protein kinase domain 850 1107 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0630 1133 Gene3D Ribonuclease Inhibitor 284 458 IPR032675 -
HCH14g0630 1133 SUPERFAMILY L domain-like 27 352 - -
HCH14g0630 1133 Pfam Leucine Rich Repeat 652 674 IPR001611 GO:0005515(InterPro)
HCH14g0630 1133 Pfam Leucine Rich Repeat 95 116 IPR001611 GO:0005515(InterPro)
HCH14g0630 1133 Pfam Leucine Rich Repeat 460 482 IPR001611 GO:0005515(InterPro)
HCH14g0630 1133 Pfam Leucine Rich Repeat 676 697 IPR001611 GO:0005515(InterPro)
HCH14g0630 1133 Pfam Leucine Rich Repeat 437 458 IPR001611 GO:0005515(InterPro)
HCH14g0630 1133 Pfam Leucine Rich Repeat 260 278 IPR001611 GO:0005515(InterPro)
HCH14g0630 1133 Pfam Leucine Rich Repeat 364 386 IPR001611 GO:0005515(InterPro)
HCH14g0630 1133 Pfam Leucine Rich Repeat 317 336 IPR001611 GO:0005515(InterPro)
HCH14g0630 1133 Pfam Leucine Rich Repeat 484 506 IPR001611 GO:0005515(InterPro)
HCH14g0630 1133 Pfam Leucine Rich Repeat 164 186 IPR001611 GO:0005515(InterPro)
HCH14g0630 1133 SUPERFAMILY L domain-like 498 737 - -
HCH14g0630 1133 FunFam Piriformospora indica-insensitive protein 2 355 452 - -
HCH14g0630 1133 PANTHER LEUCINE RICH REPEAT KINASE 2 410 1112 IPR051420 -
HCH14g0630 1133 SUPERFAMILY Protein kinase-like (PK-like) 821 1121 IPR011009 -
HCH14g0630 1133 ProSiteProfiles Protein kinase domain profile. 840 1120 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0630 1133 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 26 185 - -
HCH14g0630 1133 MobiDBLite consensus disorder prediction 793 820 - -
HCH14g0630 1133 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 464 748 - -
HCH14g0630 1133 Pfam Leucine rich repeat 188 247 IPR001611 GO:0005515(InterPro)
HCH14g0630 1133 Pfam Leucine rich repeat 508 566 IPR001611 GO:0005515(InterPro)
HCH14g0630 1133 Pfam Leucine rich repeat 579 639 IPR001611 GO:0005515(InterPro)
HCH14g0630 1133 FunFam Putative LRR receptor-like serine/threonine-protein kinase 804 915 - -
HCH14g0630 1133 SUPERFAMILY L domain-like 311 572 - -
HCH14g0630 1133 FunFam Leucine-rich repeat receptor protein kinase EMS1 203 307 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0630 HCH-Chr14:35005672 HCH14g0183 HCH-Chr14:27506950 1.50E-50 dispersed
HCH14g0630 HCH-Chr14:35005672 HCH12g0977 HCH-Chr12:7091279 5.70E-50 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81236 PF00069 Pkinase 1.20E-35 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0630 - - - 0.0