Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0676 ATGGCTTTCTCACTTTTGGCAATTCTCCTACTGTGTGTCTTCTCTTTAGGGGATTCATTGAGCTTAGATTACTACGAAAAAACATGCCCAGGCGTAGACTATATCGTTGCTAAAGCAGTCAAGGATGCAACTTCGAAAGACAAAACTGTACCTGCTGCACTCCTCAGGATGCACTTCCATGACTGCTTTATAAGGGGTTGTGATGCATCTGTACTGTTGAACTCAGTAGGGAACAACAAGGCAGAGAAAGATGGGCCACCAAACTTGTCTCTGCATTCGTTTTTTGTCATCGACAACGCAAAGAAAGAGCTGGAATCCTTTTGCCCCGGTGTCGTCTCTTGTGCTGATATCCTTGCTCTGGCTGCAAGGGATGCAGTTGTACTTTCTGGAGGCCCAACATGGTATGTCCCTAAAGGGAGAAAAGATGGAAGAATATCAAAGGCAAGTGAAACAATACAATTGCCATCTCCAAGATTCAACATTTCTCAGCTGCAACAAAACTTCAAACAAAGAGGCTTATCCTTGGACGACCTCGTCGCTCTTTCAGGAGGTCACACTTTAGGATTTGCTCATTGTTCATCCTTTCAAGGTAGAATCCGCAACTTCAGTCCAACCAGCAATGTCGATCCAGAAATGAGTCCATCCTTTGCAGCGAGTTTAAGAAACACGTGCCCAGTAAACAACAAGGCAAAAAATGCTGGCGCTACTATGGATACTTCCTCAACCACATTCGACAACACTTACTATAAATTGATACTCCAACAGAAAGGCCTGTTTTCTTCTGATCAAGCTCTGCTCAAATTTCCCAAGACCAGTGACCTGGTTTCCAAGTTTGCTAGCTCAAAGGAAGCTTTTAACAATGCATTTATTAACTCTATGATCAAAATGAGTAGCATCACTGGTGGGCAGGAAATCAGGAAGAACTGTAAGGTTGTGAACTAA 942 43.31 MAFSLLAILLLCVFSLGDSLSLDYYEKTCPGVDYIVAKAVKDATSKDKTVPAALLRMHFHDCFIRGCDASVLLNSVGNNKAEKDGPPNLSLHSFFVIDNAKKELESFCPGVVSCADILALAARDAVVLSGGPTWYVPKGRKDGRISKASETIQLPSPRFNISQLQQNFKQRGLSLDDLVALSGGHTLGFAHCSSFQGRIRNFSPTSNVDPEMSPSFAASLRNTCPVNNKAKNAGATMDTSSTTFDNTYYKLILQQKGLFSSDQALLKFPKTSDLVSKFASSKEAFNNAFINSMIKMSSITGGQEIRKNCKVVN 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 35297952 35299218 - evm.model.ptg000014l.532 HCH14g0676 558579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0676 313 FunFam Peroxidase 23 166 - -
HCH14g0676 313 Pfam Peroxidase 36 280 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 Gene3D Peroxidase, domain 2 155 296 - -
HCH14g0676 313 CDD secretory_peroxidase 20 312 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
HCH14g0676 313 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 FunFam Peroxidase 155 296 - -
HCH14g0676 313 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 SUPERFAMILY Heme-dependent peroxidases 20 313 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 ProSiteProfiles Plant heme peroxidase family profile. 19 313 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
HCH14g0676 313 Gene3D - 23 313 - -
HCH14g0676 313 PANTHER PEROXIDASE 25-RELATED 14 309 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
HCH14g0676 313 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g1181 HCH-Chr11:44145788 HCH14g0676 HCH-Chr14:35297952 5.40E-91 dispersed
HCH14g0031 HCH-Chr14:3070299 HCH14g0676 HCH-Chr14:35297952 9.50E-70 dispersed
HCH14g0676 HCH-Chr14:35297952 HCH4g1118 HCH-Chr4:7301568 2.20E-68 dispersed
HCH12g0437 HCH-Chr12:2517565 HCH14g0676 HCH-Chr14:35297952 8.80E-63 transposed
HCH14g0676 HCH-Chr14:35297952 HCH4g0812 HCH-Chr4:5229906 1.60E-119 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0676 K00430 - csv:101217954 551.977