Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0682 ATGTTATCAAGCTTGATGAATTTTCTGAGGGCTTGCTGGCTGCCGTCCTCGGGCACTATTGTACACAGTGGTTCGGATTCGGCTGGTCGGCATGATGGGTTATTATGGTACAAAGATATTGGACAGCATGTAAATGGTGAATTTTCAATGGCTGTTGTTCAGGCCAATAACTTGCTTGAGGATCAAAGCCAGATTGAATCTGGTTCATTGAGTTCTCTCGAGTCTGGACCGTATGGAACCTTTATCGGTGTCTATGACGGTCATGGTGGGCCTGAGACGTCGAATTACGTATATGATAATCTTTTCCAGCATCTAAAAAGGTTCACCTCAGAACATCAAGGAATGTCGTCTGATGTGATAAAGAAAGCATTTCAAGCAACAGAAGAGGGGTTTATTTCTCTTGTGACTAAACAATGGTCAATGAAGCCCCAAATTGCGGCTGTTGGCTCGTGCTGCCTAGTTGGTGTGATCTGTGATGGTACCCTTTACATAGCCAACCTTGGCGATTCCCGTGCTGTGCTGGGAAGGCTTGTTAGGGCAACTGAGGAAGTCATCGCTGTTCAGCTATCAGCAGAGCACAATGTGAGCATAGAATCTGTCAGACGGGAGATGCATTCTCTGCACCCAGATGACTCGCATATAGTAGTTTTAAAGCATAATGTATGGAGAGTAAAGGGCTTAATACAGGTTTCTAGATCTATCGGTGATGCATATCTAAAAAAGGCTGAATTCAACAGGGAGCCTTTATATTCAAAGTTTAGGCTTCGTGAACCGTTCACTAGGCCAATATTGAGCTGTGAGCCTTCAATTTCTGTGCATGAACTTCAACCACATGATCAATTTATCATATTTGCCTCTGATGGCTTGTGGGAGCACATGAGCAATCAGGAGGCTGTCGATATGGTTCGAAATTTCCCACATAATGGAAGCGCTAAGAGGTTGGTAAAAGCTGCTATGCAGGAAGCAGCTAAAAAACGAGAAATGCGATATTCAGATCTGAAGGAAATTGACCGTGGTGTCCGCCGCCATTTCCATGACGACATCACAGTCATAGTTGTATTTTTCGACTCAAATCTTGTGAGCAGAGCCAGCTCGGTCCGAGGCCCAACTTTGTCTTTGAGAGGGAGTGGCGTTAGCTTGCCTGCAAAGTCTCTAGCTCCCTGTTCCACACCTGCATAG 1179 45.12 MLSSLMNFLRACWLPSSGTIVHSGSDSAGRHDGLLWYKDIGQHVNGEFSMAVVQANNLLEDQSQIESGSLSSLESGPYGTFIGVYDGHGGPETSNYVYDNLFQHLKRFTSEHQGMSSDVIKKAFQATEEGFISLVTKQWSMKPQIAAVGSCCLVGVICDGTLYIANLGDSRAVLGRLVRATEEVIAVQLSAEHNVSIESVRREMHSLHPDDSHIVVLKHNVWRVKGLIQVSRSIGDAYLKKAEFNREPLYSKFRLREPFTRPILSCEPSISVHELQPHDQFIIFASDGLWEHMSNQEAVDMVRNFPHNGSAKRLVKAAMQEAAKKREMRYSDLKEIDRGVRRHFHDDITVIVVFFDSNLVSRASSVRGPTLSLRGSGVSLPAKSLAPCSTPA 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 35329750 35331669 + evm.model.ptg000014l.526 HCH14g0682 558585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0682 392 CDD PP2Cc 48 355 IPR001932 -
HCH14g0682 392 Pfam Protein phosphatase 2C 75 323 IPR001932 -
HCH14g0682 392 SUPERFAMILY PP2C-like 56 356 IPR036457 -
HCH14g0682 392 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
HCH14g0682 392 FunFam Phosphatase 2C family protein 36 365 - -
HCH14g0682 392 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169(InterPro)
HCH14g0682 392 PANTHER PROTEIN PHOSPHATASE 41 354 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
HCH14g0682 392 SMART PP2C_4 41 353 IPR001932 -
HCH14g0682 392 Gene3D - 37 365 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH11g0233 HCH-Chr11:2132814 HCH14g0682 HCH-Chr14:35329750 9.90E-145 dispersed
HCH14g0682 HCH-Chr14:35329750 HCH7g0452 HCH-Chr7:3352611 2.60E-167 dispersed
HCH13g1328 HCH-Chr13:41196164 HCH14g0682 HCH-Chr14:35329750 5.60E-186 wgd
HCH14g0682 HCH-Chr14:35329750 HCH2g0571 HCH-Chr2:49532998 4.80E-182 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0682 K01102 - csv:101219696 705.286