Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0686 ATGGCTGAGAGTCCCGAAGAGCTCTATCTCCATGGAGACCTCGACCTTAAAATTTACGAAGCTACCCAGTTGCCGAACATGGATATCGTGTCTGAACGCTTACGCCGTTGCTTCACGGCCTGTGATACTCTCAATTGCTCTTCCTCACGCGCCGCCGCCGCCGGAGACGGGAAAGTCCCCCCTCACCACCACAGTCACGGTAAAATCATCACCAGTGACCCATATGTCACCGTTCGTGTTCCTCAAGCCACTGTTGCTCGCACACGTGTCATAAAGAATTCACAAAACCCCAATTGGAATGAACATTTCATTATCCCTCTTGCTCACAAACTGTCTAATTTGGAGTTCCATGTCAAAGATGATGATGTTTTTGGTGCTGAAGTTATGGGGACTGTTAAATTTCCTGCTCGGGATGTTGCCTCTGGTGAGCTCATTAGCGGGTGGTTTCCGGTGTTGGCGTCGAATGAGAAGCCGCCGAAGGCTGGTACTTCGCTTCGGCTAGAAATGAAGTTCACCCCGGTTGAGAAGAATCCGGTGTATCGACATGGAATTGCGGCGGATCCAGAGAGGAAGGGTGTGAGGAATACTTATTTTCCTGTTAGGAAAGGGAGTGTGGTGAGATTGTATCAAGATGCTCATGTGCCTGATGGAATGTTTCCTGAGATTGAATTGGATGGAGGGAAGGTTTATAAACAAGAGAATTGTTGGGAAGATATTTGTCATGCTATAGTAGAGGCTCATCATTTGATATATATTGCTGGTTGGTCGGTTTTTCATAAGGTGAAGTTGATTAGGGAGCCGAGTAGGCCGTTGCCCCGAGGCGGGGAATTGACTCTTGGTGAATTGCTTAAGTATAAGTCGGAGGAGGGTCTGCGAGTTTTGATGTTGGTTTGGGATGATAACACTTCTCACGATAAGTTCTTTATCAATACGCAAGGATTGATGCAGACACATGATGAGGAAACCCGAAAATTTTTCAAGCACTCGTCTGTTATCTGTGTGCTTTCACCTCGCTATCCAAGTGGCAAGCTAAGCTACATGAAGCAAAAGGTTGTAGGAAATATCTTCACACACCATCAAAAATGTGTCATCGTTGATACTCAGGCATATGGTAATAATAGAAAGATAACTGCATTTCTTGGAGGTCTTGATCTCTGTGATGGTCGCTATGATACTCCTGAGCATCGACTGTTTCGTGGCCTCGATACGATATTTAAGGATGATTTTCATAATCCTACAATTCCTGCTGGAACCAAAGCTCCTAGGCAACCATGGCATGATTTGCACTGTCGAATTGATGGGCTAGCTGCATATGATGTGCTTATGAACTTTGAGCAACGTTGGAAGAGGGCTACAAGATGGACAGAGTTTGGCTTGCGGTGCAGGAGAATTTCTCACTGGCGGGATGCTTTGATAAAGATAGAGCGCATCTCCTGGATACTAAGCCCTCACTCAATTACTTTAAGGGATGACACGATGGTAGTTCCAGAAGACGACCCCAGAGTATGGGTTTCTAAGGAAGAAGACTCTGAAAACTGGCATGTTCAGATTTTCCGATCGATCGACTCTGGTTCAGTTAAAGGATTTCCAAAAGATGTCCATGTTGCCGAGTCTCAGAACCTTGTCTGTGCAAAAAATTTGGTTATAGAGAAAAGCATCGAATTGGCGTATATCCAGGCTATCAGATCTGCACAACATTTCATTTATATTGAAAATCAGTATTTTATTGGAGCATCATATGGATGGCCTTCTTATAAAAATGCTGGGGCTGATAATCTCATTCCCATGGAGTTGGCACTAAAGATTGCAAGCAAAATAAGAGCCAAGGAAAGATTTGTTGTATATATTATCATACCAATGTGGCCTGAAGGAGATCCAAATAGTGCTCCCATGCAAGAGATCCTTTATTGGCAGGGACAAACTATGCAAATGATGTATGATATTGTCGCGAGTGAATTGAAGTCATCACAGCAATCGGATTTGAACCCTCTAGATTTCCTCAATTTCTACTGCCTTGGTAAACGGGAGGAAATTTCTGAGAATGGGTTGGCTACTGACGGTACAACGGTATGCAATTCAGAAAAACACCGACGGTTTATGATTTATGTGCATGCCAAGGGAATGATAGTAGATGATGAGTATGTAATTGTTGGATCTGCCAATATTAACCAAAGATCCATGGCTGGAACAAAGGACACTGAAATAGCCATGGGTGCCTATCAGACACATCACACTTGGGCAAAGAATAAGAAACATCCATGTGGTCAGATATACGGGTACAGAATGTCGTTATGGTGTGAACATCTCGGGATGCTTGATCCGTGTTTCAAGGAACCAGAAACTTTGGAATGTGTGAGAAGAGTCAACAAGATCGCTGAAGATAACTGGAAGAGATTCGCAGATGATGAATTCACACTATTGCAGGGTCACCTTCTCAGGTATCCATTGCAGGTGGATGGTGATGGGAAAGTCAGTCCTCTAACTGGATATGAAAACTTTCCCGATGTAGGGGGGAAGGTACTAGGATCTCATTCCACCGCAATTCCTGACGTTCTGACCACGTAA 2565 44.21 MAESPEELYLHGDLDLKIYEATQLPNMDIVSERLRRCFTACDTLNCSSSRAAAAGDGKVPPHHHSHGKIITSDPYVTVRVPQATVARTRVIKNSQNPNWNEHFIIPLAHKLSNLEFHVKDDDVFGAEVMGTVKFPARDVASGELISGWFPVLASNEKPPKAGTSLRLEMKFTPVEKNPVYRHGIAADPERKGVRNTYFPVRKGSVVRLYQDAHVPDGMFPEIELDGGKVYKQENCWEDICHAIVEAHHLIYIAGWSVFHKVKLIREPSRPLPRGGELTLGELLKYKSEEGLRVLMLVWDDNTSHDKFFINTQGLMQTHDEETRKFFKHSSVICVLSPRYPSGKLSYMKQKVVGNIFTHHQKCVIVDTQAYGNNRKITAFLGGLDLCDGRYDTPEHRLFRGLDTIFKDDFHNPTIPAGTKAPRQPWHDLHCRIDGLAAYDVLMNFEQRWKRATRWTEFGLRCRRISHWRDALIKIERISWILSPHSITLRDDTMVVPEDDPRVWVSKEEDSENWHVQIFRSIDSGSVKGFPKDVHVAESQNLVCAKNLVIEKSIELAYIQAIRSAQHFIYIENQYFIGASYGWPSYKNAGADNLIPMELALKIASKIRAKERFVVYIIIPMWPEGDPNSAPMQEILYWQGQTMQMMYDIVASELKSSQQSDLNPLDFLNFYCLGKREEISENGLATDGTTVCNSEKHRRFMIYVHAKGMIVDDEYVIVGSANINQRSMAGTKDTEIAMGAYQTHHTWAKNKKHPCGQIYGYRMSLWCEHLGMLDPCFKEPETLECVRRVNKIAEDNWKRFADDEFTLLQGHLLRYPLQVDGDGKVSPLTGYENFPDVGGKVLGSHSTAIPDVLTT 854
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 35354145 35359142 + evm.model.ptg000014l.522 HCH14g0686 558589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0686 854 PIRSF PLD_plant 1 854 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
HCH14g0686 854 SMART C2_3c 13 148 IPR000008 -
HCH14g0686 854 Gene3D Endonuclease Chain A 523 752 - -
HCH14g0686 854 Pfam Phospholipase D C terminal 774 843 IPR024632 -
HCH14g0686 854 SUPERFAMILY Phospholipase D/nuclease 196 457 - -
HCH14g0686 854 Pfam C2 domain 68 150 IPR000008 -
HCH14g0686 854 SMART pld_4 699 726 IPR001736 GO:0003824(InterPro)
HCH14g0686 854 SMART pld_4 354 389 IPR001736 GO:0003824(InterPro)
HCH14g0686 854 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 699 726 IPR001736 GO:0003824(InterPro)
HCH14g0686 854 PANTHER PHOSPHOLIPASE D 9 841 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
HCH14g0686 854 FunFam Phospholipase D delta 226 469 - -
HCH14g0686 854 CDD C2_plant_PLD 8 172 - -
HCH14g0686 854 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 174 IPR035892 -
HCH14g0686 854 SUPERFAMILY Phospholipase D/nuclease 550 783 - -
HCH14g0686 854 Gene3D Endonuclease Chain A 224 462 - -
HCH14g0686 854 Pfam Phospholipase D Active site motif 701 726 IPR001736 GO:0003824(InterPro)
HCH14g0686 854 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 354 389 IPR001736 GO:0003824(InterPro)
HCH14g0686 854 Gene3D C2 domain 11 181 IPR035892 -
HCH14g0686 854 ProSiteProfiles C2 domain profile. 1 149 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0893 HCH-Chr10:11278798 HCH14g0686 HCH-Chr14:35354145 2.60E-31 dispersed
HCH14g0686 HCH-Chr14:35354145 HCH6g0948 HCH-Chr6:44300287 1.80E-245 dispersed
HCH14g0686 HCH-Chr14:35354145 HCH4g0820 HCH-Chr4:5270106 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0686 K01115 - csv:101217251 1495.33