Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0711 ATGGCCTTTTCTGATGAAAAAAATTCAAACTTGATTGAACCCTCTCATTTTCCAGAGATGGGTGGCAGGATATTTGGGCAGGAGATTAATAGGAATAATAATAATAGGAGGGCTTTGAATGCCATTAATCAAAATTCAGTGATAAATCAAGCTTACCCTTGTGTTGTTAACAAGAGAGTATTTACAGGAAAACATGAGATCTGTGAGAAGAAGCAAGTTGATCCCTTTCATAGACCGATCACGAGGAAGTTTGCTGCTCAAATTGCTAGCAGCCAACAACTTCATCATCCTCAGGAAAATAGTAAGCCTAACTCAAACTCAAATGCATTTGGACATTCCATATTTGTAGACGAGGAATGCAAGTCATTCAAAGACCACCCAGTTCCCATGTTTTTAGAGAAAGCAGAAGTAGATTTGCCTCAGGAAACAAGTCAAACGGAGGAGGTTGAAATGGAGGATATTGCAGAAGACCCCGTAATAGACATCGATGGTTCCGATGCAGAGAATCCGCTTGCCGTGGTCGATTATGTCGACGATCTCTATGCACACTATAGAAAGATAGAGAATTCCAGCTGTGTCTCCCCAGACTACATGGCTCAACAATTTGACATCAATGAGAGGATGAGAGCTATACTTATAGATTGGCTCATAGAGGTGCACGATAAGTTCGATCTGATGGGCGAAACGTTGTTTCTCACGGTGAATCTCATAGACAGATTCCTATCACAGAAAACATTAGTGAGAAAGAAGCTTCAGCTGGTTGGTTTGGTTTCAATGCTCTTAGCCTGCAAATATGAGGAAGTATCTGTCCCTATTGTGGGAGATTTGATTCTAATATCTGATAAAGCTTACTCCAGGAAAGAAGTTCTTGAAATGGAGACAGTGATGCTCAATTCTTTGCAGTTTAACATGTCAGTTCCTACACCATATGTTTTCCTGCAGAGGTTCTTCAAAGCTGCCCAATCTGACAAAAAGCTCGAGTTACTGGCCTTCTTCTTAATCGAACTTTCGCTCATCGAGTACGAAATGCTCAGATTTCGACCGTCTTTGTTAGCGGCAGCAGCAATTTACACAGCTCAATGTACTCTCACTGGTGTAAAGGAATGGAACAGGACATGTGAGTGGCATTCTAGCTACTCAGAAGATCAGCTCCTAGAATGTTCAAGATTGATGGTGGGATTCCACCAAAAAGCAGCAACAGGAAAACTTACAGGGGTTCATAGAAAGTATTGTACATCAAAATTTAACTATACAGCAAAATGTGAACCTGCACATTTTCTTTTGCAGACTCAACAATAA 1299 40.72 MAFSDEKNSNLIEPSHFPEMGGRIFGQEINRNNNNRRALNAINQNSVINQAYPCVVNKRVFTGKHEICEKKQVDPFHRPITRKFAAQIASSQQLHHPQENSKPNSNSNAFGHSIFVDEECKSFKDHPVPMFLEKAEVDLPQETSQTEEVEMEDIAEDPVIDIDGSDAENPLAVVDYVDDLYAHYRKIENSSCVSPDYMAQQFDINERMRAILIDWLIEVHDKFDLMGETLFLTVNLIDRFLSQKTLVRKKLQLVGLVSMLLACKYEEVSVPIVGDLILISDKAYSRKEVLEMETVMLNSLQFNMSVPTPYVFLQRFFKAAQSDKKLELLAFFLIELSLIEYEMLRFRPSLLAAAAIYTAQCTLTGVKEWNRTCEWHSSYSEDQLLECSRLMVGFHQKAATGKLTGVHRKYCTSKFNYTAKCEPAHFLLQTQQ 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 35539224 35541457 - evm.model.ptg000014l.497 HCH14g0711 558614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0711 432 Gene3D - 179 419 - -
HCH14g0711 432 FunFam G2/mitotic-specific cyclin-1 301 419 - -
HCH14g0711 432 CDD CYCLIN_AtCycB-like_rpt2 307 423 - -
HCH14g0711 432 PIRSF Cyclin_A_B_D_E 19 432 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
HCH14g0711 432 Pfam Cyclin, N-terminal domain 179 305 IPR006671 -
HCH14g0711 432 Gene3D - 193 305 - -
HCH14g0711 432 SMART Cyclin_C_2 307 424 IPR004367 -
HCH14g0711 432 Pfam Cyclin, C-terminal domain 307 423 IPR004367 -
HCH14g0711 432 FunFam G2/mitotic-specific cyclin 193 300 - -
HCH14g0711 432 MobiDBLite consensus disorder prediction 88 109 - -
HCH14g0711 432 SUPERFAMILY Cyclin-like 168 304 IPR036915 -
HCH14g0711 432 SMART cyclin_7 214 298 IPR013763 -
HCH14g0711 432 SMART cyclin_7 311 393 IPR013763 -
HCH14g0711 432 PANTHER CYCLINS 150 411 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
HCH14g0711 432 SUPERFAMILY Cyclin-like 306 424 IPR036915 -
HCH14g0711 432 CDD CYCLIN_AtCycB-like_rpt1 156 302 - -
HCH14g0711 432 ProSitePatterns Cyclins signature. 209 240 IPR048258 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0061 HCH-Chr12:330221 HCH14g0711 HCH-Chr14:35539224 8.00E-138 dispersed
HCH14g0711 HCH-Chr14:35539224 HCH9g0977 HCH-Chr9:7299250 6.50E-63 dispersed
HCH13g0981 HCH-Chr13:20460594 HCH14g0711 HCH-Chr14:35539224 5.80E-167 transposed
HCH2g1311 HCH-Chr2:55191893 HCH14g0711 HCH-Chr14:35539224 1.80E-70 transposed
HCH13g1311 HCH-Chr13:41075728 HCH14g0711 HCH-Chr14:35539224 3.60E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0711 K21777 - csv:101216622 728.398