Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH14g0714 | ATGAGTTGTAGATCAAATGAAGAACCAACATCTAGTTTTCCCAGGGGAAAATCATGTCAACCAAGAAATTTGCCTATACTTGATCAGGACCTCAATTTCCTTCCGTGTTCAGTTGTTGTATCTGAAGAATCCAATAATCAAATGGAAGAACTTTGTGAACCAGTTATTGTAGAAAAGAAAAGGAGGGCAACAAGTGAGCAAATTGCCAGAATTTCTTTATCAGACCTGGAGAAGTACTTTGATCTTCCAATTACAGAAGCTTCAAGAAATCTAAATGTGGGATTGACAGTACTGAAAAGGAAATGTAGAGAGTTCGGCATTCATCGGTGGCCACATAGGAAGATCAAATCCCTCGATGGTCTCATCCGAGATCTTCAGGAAGAAGCAGAGCATTGGAAAGAAGATCACAAGGCTTTGATGGCAGTGACGATAAGGCAGAGGATGTTGGAAAAAGAACGAGAGAGCATTGAGAAGACACCATTCAGAGATCTGGAGAGTGAGACCAAGAAATTTAGGCAAGATGTTTTCAAGAGAAGGCACAAGGCTAGGGCTTTAGAAAGCCAGGGTCTATAA | 573 | 40.84 | MSCRSNEEPTSSFPRGKSCQPRNLPILDQDLNFLPCSVVVSEESNNQMEELCEPVIVEKKRRATSEQIARISLSDLEKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSLDGLIRDLQEEAEHWKEDHKALMAVTIRQRMLEKERESIEKTPFRDLESETKKFRQDVFKRRHKARALESQGL | 190 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 35555870 | 35556637 | - | evm.model.ptg000014l.494 | HCH14g0714 | 558617 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH14g0714 | 190 | Coils | Coil | 115 | 142 | - | - | |
HCH14g0714 | 190 | Pfam | RWP-RK domain | 71 | 118 | IPR003035 | - | |
HCH14g0714 | 190 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
HCH14g0714 | 190 | PANTHER | PROTEIN RKD4 | 5 | 187 | IPR044607 | GO:0003700(InterPro) | |
HCH14g0714 | 190 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
HCH14g0714 | 190 | ProSiteProfiles | RWP-RK domain profile. | 53 | 138 | IPR003035 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH14g0714 | HCH-Chr14:35555870 | HCH8g1300 | HCH-Chr8:48060803 | 5.10E-20 | dispersed | |
HCH14g0714 | HCH-Chr14:35555870 | HCH4g0513 | HCH-Chr4:3387930 | 6.20E-10 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
32963 | PF02042 | RWP-RK | 8.50E-23 | No_clan | HCH | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH14g0714 | - | - | - | 0.0 |