Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0744 ATGACTGGTTCCAAAGCTTCATCAAATCAGCAAGAAAGAACAGCCCGTGGTGAAATGGTTAATGCAAAGGATGTCAAGTCTTTGCCTTCACAGATTTCTCTCCCAAGTAAACCCGAATCAGCTACTTCTGACCAGTCTAAATCAGTGCAGAGTACCTCAAAGAAGGTTTTGGAAGTATCTTCCGACAAAAGAATGCTGGTTTCTAATAAAAAAGAATCTGCTGAGTCATTGATCGATAAATTTAATTTGAATATTTCGTCATCTGGTGTGAAACAAACATCGGCTGAAGTAGATTCCCCTCACAACGAAGCTAGATGCTCACCTGGAAGCTCGATTGACCAAGAAAAGAAAACATCAGAATATGGTAGTGTAAAGAACAGTTCTTTTTCTGCCAAGGTGAGTGATGGGACCAGCAGTCTTGGCAAGACCAGTGGAAGTACTAAAATTAGTGATCCTGGTCACTTTGTTGAGAGTGGTAAGAGCAGTATATGTAGAGGAAGCACAAGCAGCGATGTCAGTGACGAGAGCTCGTGTAGTAGTTTTAGTAGTAGTATCAGTAAACCTCATAAAGCAAATGATTTGAGATGGGAAGCTATTCAAGTTGTCCGTACGAAAGATGGAGCAATGGGATTAGGTCATTTTAGACTTCTGAAGAAGTTGGGTTGTGGGGATATTGGGAGTGTTTATCTCTCGGAGTTAAGTGGCACCAAATGTTATTTTGCTATGAAGGTTATGGATAAAAATACTCTAGCAAGTCGGAAAAAATTGCTTCGTGCACAGACAGAAAGAGAAATACTTCAATCTCTTGATCATCCCTTCCTTCCAACGCTATACACCCATTTTGAAACGGAAAAATTCTCATGCTTGGTGATGGAGTTCTGCCCTGGGGGAGACTTACACACTCTACGGCAGAGGCAGCCTGGAAAGCATTTTCCTGAGCAAGCTGTGAAATTCTATGTAGCAGAGGTTCTTCTAGCGATGGAATATTTGCACATGCTTGGGATTGTGTACCGTGATCTTAAACCAGAAAATGTCCTTGTGAGGGAAGATGGACACATAATGCTGTCAGATTTTGACCTTTCACTCCGTTGTACCGTCAGTCCAACTCTCGTAAAAAATCTATCGGCAGAGTCCGAGCCATTAAGAAAGAACACAGCTTACTGTGTACAGCCTGCTTGCATTGAGCCTTCCTGCATCCAACCATCTTGTGTAGTTCCTACAACCTGCTTCTCACCTCGCCTCTTTTCTAGCAAGTCGAAGAAGGAACGTAAATCTAAAACTGAAATGGGAAATCAGGTCAGCCCATTGCCTGAGCTCATTGCAGAACCAACTGATGCCAGATCCATGTCCTTTGTCGGAACACATGAGTACTTGGCACCTGAGATTATCAAAGGTGAAGGCCATGGAAGTGCTGTAGATTGGTGGACCTTTGGTATATTTCTCTACGAACTACTATTTGGAAAAACTCCTTTTAAGGGGTCTGGAAATCGAGCTACATTATTCAACATCGTGGGTCAGCCACTTCGGTTTCCAGATGCACCGGTTGTGAGTTTTGCTGCAAAAGATCTTATAAGGGGATTGCTAATCAAGGAACCACAACACAGATTGGCTTTCAAACGTGGAGCAACTGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTGAACTGGGCACTAATACGCTGTGCTACCCCACCTGAAATCCCCAGGACTGTTGAGATCGAAAGAATACCTCATCCTGTGGCTTCGACGAGTGAAAAGGTTGTTACAGTTACGGCTGCTGCAGATAAGAAAAATTCCGATAATTATCTCGAGTTTGATTTCTTCTAG 1827 42.91 MTGSKASSNQQERTARGEMVNAKDVKSLPSQISLPSKPESATSDQSKSVQSTSKKVLEVSSDKRMLVSNKKESAESLIDKFNLNISSSGVKQTSAEVDSPHNEARCSPGSSIDQEKKTSEYGSVKNSSFSAKVSDGTSSLGKTSGSTKISDPGHFVESGKSSICRGSTSSDVSDESSCSSFSSSISKPHKANDLRWEAIQVVRTKDGAMGLGHFRLLKKLGCGDIGSVYLSELSGTKCYFAMKVMDKNTLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYVAEVLLAMEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKNLSAESEPLRKNTAYCVQPACIEPSCIQPSCVVPTTCFSPRLFSSKSKKERKSKTEMGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNIVGQPLRFPDAPVVSFAAKDLIRGLLIKEPQHRLAFKRGATEIKQHPFFEGVNWALIRCATPPEIPRTVEIERIPHPVASTSEKVVTVTAAADKKNSDNYLEFDFF 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 35712754 35716000 + evm.model.ptg000014l.464 HCH14g0744 558647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0744 608 Gene3D Transferase(Phosphotransferase) domain 1 445 569 - -
HCH14g0744 608 FunFam Serine/threonine-protein kinase AGC1-7 444 569 - -
HCH14g0744 608 PANTHER FLIPPASE KINASE 1-RELATED 68 583 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
HCH14g0744 608 MobiDBLite consensus disorder prediction 57 74 - -
HCH14g0744 608 FunFam serine/threonine-protein kinase D6PK-like 298 365 - -
HCH14g0744 608 Gene3D Transferase(Phosphotransferase) domain 1 298 365 - -
HCH14g0744 608 MobiDBLite consensus disorder prediction 1 16 - -
HCH14g0744 608 SUPERFAMILY Protein kinase-like (PK-like) 189 579 IPR011009 -
HCH14g0744 608 MobiDBLite consensus disorder prediction 90 176 - -
HCH14g0744 608 MobiDBLite consensus disorder prediction 161 176 - -
HCH14g0744 608 MobiDBLite consensus disorder prediction 1 74 - -
HCH14g0744 608 MobiDBLite consensus disorder prediction 90 151 - -
HCH14g0744 608 Gene3D Phosphorylase Kinase; domain 1 212 297 - -
HCH14g0744 608 MobiDBLite consensus disorder prediction 26 56 - -
HCH14g0744 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 335 347 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0744 608 CDD STKc_phototropin_like 213 569 - -
HCH14g0744 608 ProSiteProfiles Protein kinase domain profile. 214 551 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0744 608 FunFam Serine/threonine-protein kinase D6PK-like 212 297 - -
HCH14g0744 608 SMART serkin_6 214 551 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0744 608 Pfam Protein kinase domain 215 366 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0744 608 Pfam Protein kinase domain 448 551 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH10g0432 HCH-Chr10:3449487 HCH14g0744 HCH-Chr14:35712754 1.20E-118 dispersed
HCH14g0744 HCH-Chr14:35712754 HCH6g0888 HCH-Chr6:43684662 5.50E-217 dispersed
HCH14g0744 HCH-Chr14:35712754 HCH3g1038 HCH-Chr3:14475731 4.30E-246 wgd
HCH14g0744 HCH-Chr14:35712754 HCH7g0369 HCH-Chr7:2662668 5.30E-87 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81241 PF00069 Pkinase 2.30E-37 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0744 K08286 - csv:101209748 1018.84