Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0760 ATGCAAGCATCTCATAGTCATCAGGCTTCATCTAACGTCCATGGGGTGTATCGGCAATCTATGGAAGAGATCGATCCCTTCTATTTATCTAATTTCCATGCAATAGAAAACAATGCCTCTCCTGACATAGGCAGTCAGGGAAACACTGTTACCTTCCAGTCGTATAAGGAGCCATTTTTTACTTTGGAATCCTTCCCGGCTACTGCTGATCTTAGTGCCTGTAATTCCCCTTCTGCTATTAGCGTTTTGTCTTCCAGGAGTCCCTTTTCACCTCAATATTCTCAATCATGCTCCTCAGATCAACATCATTCCTCCGACAACACGTGTGGATCACCACTGAGTGGATGTTCTGGTGTTGATGATGAGAATGACTTGAAGCATAAGCTGAAGGAATTGGAAATTTCTTTACTGGGGCCTGAAGCTGATATTGAAGACAGCTGCTACTGCTCTTTCAGGGGTGGGACACATCAAGCTACTTCGATGGCAAGGTGGAATTGGAATCAAATGGTAGAGGCGATTCCTAGATTGAGCCTTAAAGATGCGCTTATTACTTGTGCACAAGCAATTCACGAGTCTGATTTCACAGCAGCGGCGTTATTTATGGATGTGTTGGGGCAGATGGTTTCAGTAGCAGGTGACCCAATTCAGAGGTTGGGTGCTTACATGTTGGAAGGGCTTAGAGCAAGATTGGAGCGATCTGGGAGTGCAATATACAAGGCCCTGAAGTGTGAAGAACCAACAAGCTCTGAACTAATGTCCTATATGTCTATTCTTTACCAGATCTGTCCATACTGGAAATTCGCATACACTTCAGCGAATGTTGTCATTTGGGAGGCCATGGCAAATGAACCTAGAATTCACATTATTGATTTTCAAATTGCACAGGGCAGTCAGTGGATACCTCTCATCCAAGATTTTGCAAAACTGCCTGGTGGACCCCCAATTGTTCGCATTACAGGTGTGGATGATTCCCAATCAGCTCATGCTCGGGGAGGGGGACTTCACATTGTAGGGCAGAAGCTATCACGCCTTGCGGAGTCATGTGGAGTTCCCTTTGAATTTCATGCTGCTGCAATGTGTGGTAGCGAGGTTGAACGCAGGAATCTTAGAATACTACCCGGTGAAGCATTGGTGGTAAATTTTCCATACATCTTGCATCACATGCCAGATGAAAGTGTGAGCATTCAGAATCATCGAGACCGACTTCTAAGGTTGGTTAAGAGTTTATCGCCCAAAGTTGTAACCATTGTGGAGCAGGAATCCAACACAAACACTTCCCCATTCTTTTCACGTTTTATAGAGACGCTGGATTATTACACAGCTATGTTCGAATCAATAGATGTCGCTCGTCCGAGAGACGACAAGCAGAGGATCAGTGCCGAGCAGCATTGTTTGGCCAGAGACATCGTGAACATGTTAGCTTGCGAGGGGGATGAAAGGATAGAACGGCACGAACTTCATGGCAAGTGGAATATGAGATTGGGGATGGCCGGATTCACTCCATATCCAATGAGTTCTTCCGTGACCAGGGCCGTCAAGAATATGTTGAGTGACTACAATGACAACTATAGACTCCAAGAAATGGACGGGGCTCTCTACCTAGGCTGGAAAAACAGAGCTATGGCAACCTCATCTGCATGGAGATAA 1647 45.48 MQASHSHQASSNVHGVYRQSMEEIDPFYLSNFHAIENNASPDIGSQGNTVTFQSYKEPFFTLESFPATADLSACNSPSAISVLSSRSPFSPQYSQSCSSDQHHSSDNTCGSPLSGCSGVDDENDLKHKLKELEISLLGPEADIEDSCYCSFRGGTHQATSMARWNWNQMVEAIPRLSLKDALITCAQAIHESDFTAAALFMDVLGQMVSVAGDPIQRLGAYMLEGLRARLERSGSAIYKALKCEEPTSSELMSYMSILYQICPYWKFAYTSANVVIWEAMANEPRIHIIDFQIAQGSQWIPLIQDFAKLPGGPPIVRITGVDDSQSAHARGGGLHIVGQKLSRLAESCGVPFEFHAAAMCGSEVERRNLRILPGEALVVNFPYILHHMPDESVSIQNHRDRLLRLVKSLSPKVVTIVEQESNTNTSPFFSRFIETLDYYTAMFESIDVARPRDDKQRISAEQHCLARDIVNMLACEGDERIERHELHGKWNMRLGMAGFTPYPMSSSVTRAVKNMLSDYNDNYRLQEMDGALYLGWKNRAMATSSAWR 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 35787190 35788836 + evm.model.ptg000014l.448 HCH14g0760 558663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0760 548 ProSiteProfiles GRAS family profile. 169 548 IPR005202 -
HCH14g0760 548 Pfam GRAS domain family 178 548 IPR005202 -
HCH14g0760 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 147 547 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0760 HCH-Chr14:35787190 HCH6g0857 HCH-Chr6:43379011 2.80E-151 dispersed
HCH14g0760 HCH-Chr14:35787190 HCH2g0668 HCH-Chr2:50476335 8.80E-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
32967 PF03514 GRAS 4.60E-126 CL0063 HCH TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0760 K27748 - csv:101207883 853.973