Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0779 ATGGCTACCTCATGTTTTGGTTCAACTTGGTTGCGAAAATCAAAGAGCAAGCCTTTATCAACCCCTTCCTCAATGAAATCCCAGATGAATTCTGAAATGGAAAATATGGAGAGGAGGAGATTTGATAGTCTGGAATCATGGTCTATGATATTAGAGTCTGAAAATGTGGAAACATGGGAGACATCAAAGGAGGATCAAGAGGAATGGACAGCTGATTTATCGCAGCTCTTCATCGGCAACAAATTCGCATCCGGTGCTCATAGTCGAATTTACCGTGGAATTTACAAGCAAAGAGCTGTTGCTGTAAAGATGGTGAGAATTCCAAACCAAAAGGAGGAGACAAGAACCAAGCTTGAGCAGCAGTTTAAATCAGAAGTTGCCTTGCTCTCACGTCTCTTCCATCACAATATAGTTCAGTTCATTGCAGCTTGTAAAAAGCCACCTGTATATTGCATAATAACTGAGTATATGTCACAAGGGACTCTGAGGATGTATCTAAACAAAAAAGAGCCATATTCACTCTCAACAGAAACAATATTGAGGCTAGCTCTTGACATATCAAGAGGAATGGAATATCTTCATTCTCAAGGTGTGATTCACAGAGACCTCAAATCAAATAACTTGCTTCTAAATGATGAAATGAGGGTGAAAGTAGCGGATTTCGGAACCTCGTGCCTCGAAACACAATGTCGAGAATCGAAAGGGAACATGGGAACTTACCGATGGATGGCACCGGAGATGATCAAGGAGAAACCTTACACTCGGAAAGTCGATGTCTATAGCTTTGGTATTGTGCTGTGGGAGCTTACAACATCTTTGCTTCCATTCCAAGGAATGACCCCTGTGCAGGCTGCATTTGCCGTGGCAGAGAAGAATGAAAGGCCGCCATTGCCGGCGAGTTGTCAGCCGGCGCTGGCACACCTAATAAAGCGGTGTTGGGCGGCGAATCCATCAAAACGGCCGGATTTCAGCGACATAGTAGTTGCTTTGGAGAAGTACGATGAATGTGTGAAAGAAGGTCTTCCATTAACACACCATAGACGACTTGTAAGCAGAAACGCCATTCTTGAACGCTTGAAAGGCTGTGCTGTACATGCTTGA 1101 43.69 MATSCFGSTWLRKSKSKPLSTPSSMKSQMNSEMENMERRRFDSLESWSMILESENVETWETSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQKEETRTKLEQQFKSEVALLSRLFHHNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCRESKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTSLLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWAANPSKRPDFSDIVVALEKYDECVKEGLPLTHHRRLVSRNAILERLKGCAVHA 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 35874416 35876490 - evm.model.ptg000014l.429 HCH14g0779 558682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0779 366 PANTHER SERINE-THREONINE PROTEIN KINASE 43 331 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
HCH14g0779 366 SUPERFAMILY Protein kinase-like (PK-like) 51 327 IPR011009 -
HCH14g0779 366 MobiDBLite consensus disorder prediction 13 32 - -
HCH14g0779 366 FunFam serine/threonine-protein kinase HT1 159 352 - -
HCH14g0779 366 Gene3D Transferase(Phosphotransferase) domain 1 159 351 - -
HCH14g0779 366 Gene3D Phosphorylase Kinase; domain 1 65 158 - -
HCH14g0779 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0779 366 ProSiteProfiles Protein kinase domain profile. 76 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0779 366 FunFam Serine/threonine-protein kinase isoform 1 66 158 - -
HCH14g0779 366 CDD STKc_MAP3K-like 83 327 - -
HCH14g0779 366 MobiDBLite consensus disorder prediction 13 31 - -
HCH14g0779 366 PRINTS Tyrosine kinase catalytic domain signature 154 167 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0779 366 PRINTS Tyrosine kinase catalytic domain signature 238 248 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0779 366 PRINTS Tyrosine kinase catalytic domain signature 192 210 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0779 366 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0779 366 PRINTS Tyrosine kinase catalytic domain signature 301 323 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0779 366 SMART serkin_6 76 337 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0779 366 Pfam Protein tyrosine and serine/threonine kinase 79 329 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0779 HCH-Chr14:35874416 HCH3g0334 HCH-Chr3:2105615 1.00E-109 dispersed
HCH14g0779 HCH-Chr14:35874416 HCH3g0500 HCH-Chr3:3237128 1.50E-39 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81242 PF07714 PK_Tyr_Ser-Thr 1.10E-67 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0779 - - - 0.0