Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0798 ATGGACAAAGGATGGGGACTAACCCTTCATGATTCTGACTCCATTGGCTGCTTCTTAAACAAGCCTTCCACTGTCAATTCCTTTCTAGACCTCGAGCGTGAGAATTTTCGTCTCCGGAACAATATTGGTGACCCCAAGATTAGAATGTTTCGTGGTAACGACGACACGGCTCCTCCGCCGGCCGATGACAACCGTCTTGTCGTCAACGAAGTCGACTTCTTTTCCGACAACAAAAGGGTTTCTGTCGATGATGATCATGAAACCAAACCCACTAATATCATCAACTCTATCCATAGAGAAGACAAGGTCTTGAATATTGTCAACACTGGTTTGCATCTGTTAACTGCTAATACCGGGAGCGATCAGTCTACTGTTGATGATGGGATTTCATCGGATGGTGAAGAGAAACGAGCCAAAAACGAGTTAGCAACGCTTCAAGGGGAGCTACAACGTATGAATGTCGAAAATCATAAACTAAGAGACATGTTAAGTCATGTTAGCAATAATTACAATGCCTTGCAAATGCATCTCTTGAGCTTGATGCAGCAACGACACAACCAGGAATCCGAATCTGCTCAAGAACGAGAGATTACCGAAAGGAAATCTATAGAAAAACATGAAGTTAATGGAAGAGTGATGATACCGCGGCAATTTATGGATCTAGGACCAAATACTGTCACGGCTGAAACTGATGAGTTATCTCATTCTTCATCGGATGAAAGAACTCGTTCCGGGTCTCCACCGAATAACGGAGAAACAGGTTCTAAGAAAAGCGTTGCAGGAAAAGATCAAGAAAATATGGTTCCATCTGATCAAGAGAATTCCAATTTCAGAGATGGGAAAAGAAGGGAAGAAAGTCCTGAGTCAGAATCTCATGGTTGGGGACCTAATAAAGTTGCTAGATTGAATTCTTCTAAACCAATTGATCAATCAACAGAAGCTACCATGAGGAAGGCTCGTGTATCGGTCCGTGCTCGATCGGAAGCTCCCATGATTTCTGATGGATGTCAATGGAGGAAATATGGACAAAAAATGGCGAAAGGAAACCCTTGTCCACGAGCTTATTATAGATGCACCATGGCAATAGGCTGCCCCGTTCGTAAACAAGTTCAACGATGTGCTGAAGATAGGACTATTTTGATAACAACCTACGAAGGCAACCATAACCACCCTCTACCGCCGGCTGCAATGGCTATGGCATCGACAACGACAGCGGCCGCGACGATGCTGTTATCGGGGTCCATGTCGAGTGCAGATCATAACCTCATGAACCCCAATTTGCTTGCTAGAGCGATACTTCCTTGTTCCACAAGCATGGCTACAATTTCAGCTTCGGCTCCATTTCCCACCATCACACTAGACCTTACTCATACTTCTTCAAACCCTTTACAGTTCCAAAGACCGGCACCCCAATTCCACGTACCGTTCCCAGTCGGGCAGCCGCCGCAGAACTTCGGCTCACCGTCGGCTGGACAATTGCCTCAAATCTTAGGTCAAGCACTTTATAATCAATCTAAATTCTCTGGCCTGCAGCTCTCTCATGAGATGAATTCAAATAGCTCCCATTTGGGTCATCAAGTAACACAGCTTCATCAGTCTCAGCCAGCTGCTGCCAATTATGCTGACTCATTAAGTGCAGCTACTGCTGCCATTACTGCTGATCCAAACTTCACCGCCGCCCTCGCCGCCGCTATCTCCTCGATCATCGGTGGCGCGCATTCGAATAATAACAACAACCCCACCACCAACAACACCAACAACAACGGAAACACAAACATCACATCAAGCAACAACAGCAAAATTAGCAGTTTCCCAGGAAATTAA 1824 45.45 MDKGWGLTLHDSDSIGCFLNKPSTVNSFLDLERENFRLRNNIGDPKIRMFRGNDDTAPPPADDNRLVVNEVDFFSDNKRVSVDDDHETKPTNIINSIHREDKVLNIVNTGLHLLTANTGSDQSTVDDGISSDGEEKRAKNELATLQGELQRMNVENHKLRDMLSHVSNNYNALQMHLLSLMQQRHNQESESAQEREITERKSIEKHEVNGRVMIPRQFMDLGPNTVTAETDELSHSSSDERTRSGSPPNNGETGSKKSVAGKDQENMVPSDQENSNFRDGKRREESPESESHGWGPNKVARLNSSKPIDQSTEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAIGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMAMASTTTAAATMLLSGSMSSADHNLMNPNLLARAILPCSTSMATISASAPFPTITLDLTHTSSNPLQFQRPAPQFHVPFPVGQPPQNFGSPSAGQLPQILGQALYNQSKFSGLQLSHEMNSNSSHLGHQVTQLHQSQPAAANYADSLSAATAAITADPNFTAALAAAISSIIGGAHSNNNNNPTTNNTNNNGNTNITSSNNSKISSFPGN 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 36000667 36003005 + evm.model.ptg000014l.410 HCH14g0798 558701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0798 607 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 125 576 IPR044810 GO:0003700(InterPro)
HCH14g0798 607 Coils Coil 135 162 - -
HCH14g0798 607 Gene3D WRKY domain 317 394 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
HCH14g0798 607 Pfam WRKY DNA -binding domain 334 391 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
HCH14g0798 607 MobiDBLite consensus disorder prediction 275 291 - -
HCH14g0798 607 MobiDBLite consensus disorder prediction 240 257 - -
HCH14g0798 607 FunFam probable WRKY transcription factor 31 317 394 - -
HCH14g0798 607 MobiDBLite consensus disorder prediction 576 607 - -
HCH14g0798 607 ProSiteProfiles WRKY domain profile. 327 393 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
HCH14g0798 607 SUPERFAMILY WRKY DNA-binding domain 325 393 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
HCH14g0798 607 MobiDBLite consensus disorder prediction 188 211 - -
HCH14g0798 607 SMART WRKY_cls 332 392 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
HCH14g0798 607 MobiDBLite consensus disorder prediction 183 316 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0798 HCH-Chr14:36000667 HCH3g0273 HCH-Chr3:1734331 1.60E-38 dispersed
HCH14g0798 HCH-Chr14:36000667 HCH6g0815 HCH-Chr6:42922149 3.00E-74 wgd
HCH14g0798 HCH-Chr14:36000667 HCH7g0245 HCH-Chr7:1692539 5.40E-124 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
32970 PF03106 WRKY 5.30E-24 CL0274 HCH TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0798 - - - 0.0