Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH14g0815 | ATGGCTTGCTCAAACTTAACAATGTGGGTCTCTTCAAAACCTTCTCTTTCAGACGCCTCTTCCCTTTCCTTCCGTTCCTTCATCAACCCTCTTCCAAATCCCAACACCCCTTCTCCAGTTTTCACTTCACGGCCATCCACTGTCTCTCCCATTCAATGCGGTCTCCGTGAGCTTCGTGATCGAATTGATTCTGTGAAAAACACTCAGAAAATCACTGAAGCTATGAAGCTTGTTGCTGCCGCAAAAGTTCGTAGAGCTCAAGAAGCTGTTGTTAATGGAAGACCCTTTTCAGAATCTCTCGTTGAAGTTCTCTACAATATCAATGAACAGCTTCAAACTGAAGATGTTGATGTTCCTTTAACAAAAGTCAGACCTGTAAAAAAAGTTGCTTTAGTTGTTGTTACAGGTGATCGTGGTCTCTGTGGTGGTTTCAACAATTACATCCTTAAAAAAGCAGAAGCAAGAATTGCAGAATTGAAGACTCTTGGTCTTGATTATGTTGTTATTAGTGTTGGAAAAAAGGGAAATACTTATTTCCTTCGTAGACCTTATATCCCTGTTGATAGATTTTTTGAAGGAAGTAATCTTCCAACAGCTAAAGAAGCTCAGGCAATTGCTGATGATGTTTTCTCTCTCTTTATCAGTGAGGAAGTTGATAAAGTTGAGCTTTTGTATACGAAGTTTGTGTCTTTGGTCAAATCTGATCCTGTGATTCATACACTTCTTCCACTTTCACCAAAAGGAGAGATTTGTGATATAAATGGTGTTTGTGTTGATGCTGCAGAAGATGAGTTTTTCAGGTTAACAACAAAAGAAGGGAAATTGACTGTGGAGAGAGATGTTATCAGGACAAAGACATCAGATTTCTCACCAATTTTGGAATTTGAGCAAGACCCAGTTCAGATTCTTGACGCTTTGTTACCTCTTTATTTGAATAGTCAAATTTTGAGGGCTTTACAGGAATCATTAGCTAGTGAGCTTGCAGCTAGAATGAGTGCCATGACTAATGCTACTGATAATGCATCAGAGTTGAAGAAGACATTGTCAAATATTTATAACAGACAACGTCAGGCCAAAATTACTGGTGAGATATTGGAGATTATTGCTGGTGCAGATGCTTTGGTCTAG | 1128 | 39.01 | MACSNLTMWVSSKPSLSDASSLSFRSFINPLPNPNTPSPVFTSRPSTVSPIQCGLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNYILKKAEARIAELKTLGLDYVVISVGKKGNTYFLRRPYIPVDRFFEGSNLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDVIRTKTSDFSPILEFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMTNATDNASELKKTLSNIYNRQRQAKITGEILEIIAGADALV | 375 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 36078959 | 36080086 | - | evm.model.ptg000014l.393 | HCH14g0815 | 558718 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH14g0815 | 375 | Hamap | ATP synthase gamma chain [atpG]. | 52 | 374 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
HCH14g0815 | 375 | FunFam | ATP synthase gamma chain, chloroplastic | 122 | 245 | - | - | |
HCH14g0815 | 375 | FunFam | ATP synthase gamma chain, chloroplastic | 53 | 120 | - | - | |
HCH14g0815 | 375 | PRINTS | ATP synthase gamma subunit signature | 321 | 340 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
HCH14g0815 | 375 | PRINTS | ATP synthase gamma subunit signature | 126 | 145 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
HCH14g0815 | 375 | PRINTS | ATP synthase gamma subunit signature | 219 | 236 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
HCH14g0815 | 375 | PRINTS | ATP synthase gamma subunit signature | 352 | 373 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
HCH14g0815 | 375 | CDD | F1-ATPase_gamma | 55 | 371 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
HCH14g0815 | 375 | FunFam | ATP synthase gamma chain, chloroplastic | 271 | 374 | - | - | |
HCH14g0815 | 375 | NCBIfam | ATP synthase F1 subunit gamma | 54 | 374 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
HCH14g0815 | 375 | SUPERFAMILY | ATP synthase (F1-ATPase), gamma subunit | 54 | 374 | IPR035968 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
HCH14g0815 | 375 | Pfam | ATP synthase | 55 | 374 | IPR000131 | GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro) | |
HCH14g0815 | 375 | Gene3D | ATP synthase, gamma subunit, helix hairpin domain | 271 | 374 | - | - | |
HCH14g0815 | 375 | Gene3D | ATP synthase, gamma subunit, helix hairpin domain | 53 | 122 | - | - | |
HCH14g0815 | 375 | ProSitePatterns | ATP synthase gamma subunit signature. | 360 | 373 | IPR023632 | - | |
HCH14g0815 | 375 | PANTHER | ATP SYNTHASE GAMMA CHAIN | 1 | 374 | IPR000131 | GO:0000275(PANTHER)|GO:0009535(PANTHER)|GO:0015986(PANTHER)|GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)|GO:0046933(PANTHER) | |
HCH14g0815 | 375 | Gene3D | - | 123 | 245 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH14g0815 | HCH-Chr14:36078959 | HCH6g0793 | HCH-Chr6:42700077 | 7.00E-122 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH14g0815 | K02115 | - | csv:101214408 | 612.838 |