Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0829 ATGGAGTTAGTGGATATTCTAGTTTTTTTCGTGGCTATCATCTTTTTCTTCTTATGGTGGCGTTACTGGTCGGCGACCGGTGGAGGATCGAAAAATCTTCCACCCGGACCACCGGGTTGGCCGATTGTCGGAAACCTAATCCAAGTCATACTCCAACGCCGTCCTTTCATGTACATTGTACGTGATTTACGTGAAAAGTACGGTCCTATTTTCACCATGCAAATGGGGCAAAGAACTCTCATCATTATCTCTAGCTCCGAACTCATTCATGAAGCTCTCGTCGAAAGAGGTCCGTTATTCGCCAGCCGCCCCGCTGACTCTCCCATCCGCCTTGTCTTCAGCGTCGGAAAGTGCGCCGTGAACTCCGCCGTGTACGGTCCTCTTTGGCGTACTCTTCGGCGGAACTTCGTGACGGAGCTCATTAACCCTACGAGAGTCAAGCAGTGCAGCTGGATAAGAAAATATGCCATCGAAAACCACTTAGAAAGGCTAAAGAAAGAGAATTCAGAGAAAGGATTCGTTGAAGTAATGAGTAACTGCAGACTCTCCGTTTGTAGTATTCTCATATGCATATGTTTTGGAGCGAGAATTCCGGAACAAGACATTAAGGTCATAGAAAGCATATTAAAAGATGTCATGCTTATAACATTACCAAAACTCCCAGATTTCTTACCAATTCTCACTCCCTTGTTCCGCCGCCAACTGAAAGAAGCAAAAGAGCTAAGAAAGAAACAGTTACAATGTCTCATTCCATTGATAAGGAGAAGAAGATTGTTTGTCGAAGGACACGGCGACAAGATCGTGTCCGAGGAGTTACCGGAGATGGTTAGTCCGATTGGGGCAGCATATCTTGACTCGTTGTTTGAGTTAGAAACGCCGGGCCGTGGCCGGTTAGGAGAGGAGGAGCTAGTGACTCTTTGCTCGGAAGTTATTAATGCTGGAACTGATACGAGCGCTACAGCTTTGGAATGGGCTTTACTTCATTTAGTACAAGAACAAGAGATTCAAGAAAGGTTATATAAAGAAATAGTAAGTGTTATAGGTAAAGATGGGGTTGTAACAGAGCACGATATTGAGAAAATGCCATATTTGGGAGCGGTTGTGAAAGAGACTTTCCGGCGACACCCACCAAGTCATTTTCTGCTTTCTCACGCCGCCACGAAAAAGACGGAGCTCGGAGGGTATACAATACCGGCCGATGCCAGCGTGGAGTTTTACACAGCATTTTTGTCGGAAGATCCGAACACGTGGGAGAAGCCGGGAGAATTCCGACCGGAGAGATTCTTGGAAGGTGATGGTGTCGGAGTCGATGTGACCGGGACAAAGGCGGTGAAGATGGTGCCGTTTGGGGCAGGGAGACGGATCTGCCCGGCTATGACATTGGGTACGTTGCATGTGCATATGATGCTGGCTAGAATGATCCATGCATTCAAGTGGGTTCCCGTTCCTGGAGCTCCACCCGACCCGACTGAGACTTTTGCTTTCACAGTTATTATGAAGAACCCTTTGAAAGCTGTCATATTGCCTAGGTCAATAGTCTAA 1542 47.02 MELVDILVFFVAIIFFFLWWRYWSATGGGSKNLPPGPPGWPIVGNLIQVILQRRPFMYIVRDLREKYGPIFTMQMGQRTLIIISSSELIHEALVERGPLFASRPADSPIRLVFSVGKCAVNSAVYGPLWRTLRRNFVTELINPTRVKQCSWIRKYAIENHLERLKKENSEKGFVEVMSNCRLSVCSILICICFGARIPEQDIKVIESILKDVMLITLPKLPDFLPILTPLFRRQLKEAKELRKKQLQCLIPLIRRRRLFVEGHGDKIVSEELPEMVSPIGAAYLDSLFELETPGRGRLGEEELVTLCSEVINAGTDTSATALEWALLHLVQEQEIQERLYKEIVSVIGKDGVVTEHDIEKMPYLGAVVKETFRRHPPSHFLLSHAATKKTELGGYTIPADASVEFYTAFLSEDPNTWEKPGEFRPERFLEGDGVGVDVTGTKAVKMVPFGAGRRICPAMTLGTLHVHMMLARMIHAFKWVPVPGAPPDPTETFAFTVIMKNPLKAVILPRSIV 513
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 36200641 36202271 - evm.model.ptg000014l.379 HCH14g0829 558732
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0829 513 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0829 513 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0829 513 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0829 513 SUPERFAMILY Cytochrome P450 34 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0829 513 Gene3D Cytochrome P450 29 512 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0829 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 509 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
HCH14g0829 513 Pfam Cytochrome P450 34 501 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0829 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH14g0829 513 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0829 513 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0829 513 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0829 513 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0829 513 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0829 513 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0829 513 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0829 513 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0829 513 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g0829 513 CDD CYP77_89 66 504 - -
HCH14g0829 513 FunFam Cytochrome P450 family protein 28 512 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0829 HCH-Chr14:36200641 HCH1g0727 HCH-Chr1:56086021 3.50E-124 dispersed
HCH14g0829 HCH-Chr14:36200641 HCH13g0340 HCH-Chr13:2281347 8.30E-126 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0829 K21995 - csv:101216852 925.235