Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0830 ATGATTTCTTCAGCAAAGCTCTCATCTTCATACTTCACTTCCTCAGAATTCTTGAACAGAAAATCTCTTTTCGCAAGGCCACAACTTTCTCAACACCCATCCAATCAAATTGCTCAAAAGGAATTCAATCACTCTCTTTCTACTGAAAAACCACTTCATATTTCATCAATTGAGAATCTTTCGTTGCTGAGAAAATCCCAGAATCGTTTGATAGAGTGTAAAGCATATGAGGCAGAATCACGTCCTTTGCCGATTAACATTGAGCTTCCTGATGAAAAAACGACTCAAAAATTCAAAATTGGTTTGTATTTTGCAACATGGTGGGCTTTGAATGTGGTTTTTAATATCTACAACAAGAAGGTTCTTAATGCGTTCCCTTATCCATGGCTCACTTCCACCCTCTCCCTTGCCACTGGTTCTCTTATGATGCTTGTTTCTTGGGCTACCAAGATTGCCGAGGCCCCGAAAACCGATTTCGATTTCTGGAAGACCCTTTTCCCGGTTGCTATAGCTCATACTATTGGTCATGTGGCAGCAACTGTGAGCATGTCAAAAGTTGCAGTTTCATTTACACACATAATAAAGAGTGGTGAGCCTGCATTCAGTGTGTTGGTTTCCAGGTTTCTCCTTGGTGAGATGTTCCCAACGCCTGTTTACCTATCACTTCTTCCAATCATCGGAGGGTGCGCTCTTGCCGCCGTAACCGAGCTCAATTTCAACATGATTGGTTTCATGGGAGCCATGATATCGAATTTAGCATTCGTGTTTCGAAACATATTCTCAAAGAAAGGGATGAAGGGGAATTCTGTTAGTGGAATGAACTACTATGCCTGCCTGTCTTTGCTGTCTTTACTCATTCTTACTCCTTTTGCCATCGCTGTGGAGGGACCAAAGGTGTGGGCTGCTGGATGGGACAAAGCTCTCTCTCAAATTGGTCCCAATTTCATATGGTGGTTAGCAGCTCAAAGTGTGTTCTATCACTTGTATAATCAGGTGTCATACATGTCTCTTGATCAGATATCTCCCTTGACATTTAGCATAGGAAACACAATGAAGAGGATATCAGTTATAGTGGCTTCCATTATCATCTTCAACACGCCTCTCCAACCGGTCAATGCTCTCGGGGCCGCCATTGCAATCCTCGGTACCTTCCTCTACTCACAGGCAAAGCTGTGA 1176 42.86 MISSAKLSSSYFTSSEFLNRKSLFARPQLSQHPSNQIAQKEFNHSLSTEKPLHISSIENLSLLRKSQNRLIECKAYEAESRPLPINIELPDEKTTQKFKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLATGSLMMLVSWATKIAEAPKTDFDFWKTLFPVAIAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEMFPTPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGNSVSGMNYYACLSLLSLLILTPFAIAVEGPKVWAAGWDKALSQIGPNFIWWLAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVASIIIFNTPLQPVNALGAAIAILGTFLYSQAKL 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 36209074 36210858 - evm.model.ptg000014l.378 HCH14g0830 558733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0830 391 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 99 390 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
HCH14g0830 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 284 388 - -
HCH14g0830 391 PANTHER SOLUTE CARRIER FAMILY 35 96 390 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
HCH14g0830 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 234 - -
HCH14g0830 391 Pfam Triose-phosphate Transporter family 99 387 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0830 HCH-Chr14:36209074 HCH7g1518 HCH-Chr7:47715233 6.70E-83 dispersed
HCH14g0942 HCH-Chr14:36966271 HCH14g0830 HCH-Chr14:36209074 3.70E-60 transposed
HCH1g0878 HCH-Chr1:57315873 HCH14g0830 HCH-Chr14:36209074 1.80E-62 transposed
HCH12g1168 HCH-Chr12:9962149 HCH14g0830 HCH-Chr14:36209074 6.50E-155 wgd
HCH14g0830 HCH-Chr14:36209074 HCH6g0777 HCH-Chr6:42561872 5.30E-157 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0830 K15283 - csv:101216621 612.453