Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0844 ATGGAAATGGCAACTTCGAGAAAACTGTTTTTCTTTCTCTTCATTCTCTTAGCAACGGTTTGTGCGACCATTTGTCAGCCAGATTTTGTAACACATTCATGTTCATCAGACAGAGGAAACTATACAACCAACAGCCCGTTTAGGCAAAATCTCGACAGCTTACTTTCGTCCATTTCCACGAGCACCCAGTTGATGAATTCTGGATTTTACAACTCCTCGTCCGGACAAGAACCCGACAGAGTTAACGTTATGGCTCTTTGTCGTGGAGATTTTTCGGTCCAAGATTGCCGGAACTGCCTCAATGACTCTACGAGGAAGATTTTAGAGGTTTGTCCGAACGAGAAGGAAGGTATTGGATGGTACAATGACTGCATGCTTCGTTACTCAAATACCTCAATATTCGGTGTTCTAAACACTGGGGGCTTCTTCAATGCTTTCAACACTGGGAATTCTTCAGACCCAACTGGGTTCACTCAGGCATTGAGGAATCTCATGGATAGACTAAGACAAGTTGCTGCATCAGGAGATTCCTTACGTAAATTTGCTGTTGGAGAAATAGCCGCCCCGAATTTCGACACCATTTATGGGCTTATCCAATGTACTCCTGATTTGTCTTCTTTGAATTGTAATAATTGCATTCTTCGGCTTGTTTCATCCATTACTGTTGGTAGTTTAGGAGCTAGAATCTTTACTACTAGTTGTAATTTGAGATATGAGATCGAACTTTTCTATAATTTGCCTGCACCACCACCTCCACCTCCACCCACGGCCGATGGCGGCCCATCGTCCCTGCCACCTCCTCTTCAGCCTCCAACAACAGAAAATAATGGCAATGCTGCTAGAACTGCTGCAATCGTTATCGTGTCGACGGTTGTACCTACCATTCTAGTTATTGGTATTTGCATCTTCTTGAGAATGAGGAGGCGAAAACACAAAAAATCATCAGAGAATGTTGAAAGCTCTGCTTTTCGAGAAGCCGATGACGAGATTAGCAGTGTGGAGATGTTACAATATGATTTTGCCACAATTAAAGTAGCAACAAATGACTTTTCTAATGAAAACAAGCTTGGACAGGGTGGATTTGGAGCTGTTTACAAGGGTAAGCTAAGTAATGGACAAAATATAGCAGTGAAAAGGCTTTCTAGAGATTCAGGACAAGGTGATCTTGAATTCAAAAATGAAGTCCTTTTGGTGGCTAAGCTTCAACATAGAAACTTGGTTAGGCTGCTGGGATTCTGCTTGGAACGTAGTGAAAGACTTCTCATTTATGAGTTTGTGCCAAATGCTAGCCTTGACCAATTCATATTTGATTTCACCAAGCGGACGCTTTTAGATTGGGAAAGACGTTTCAAAATCATCAGCGGTGTTGCTCGAGGGCTTCTTTACCTACATGAAGATTCTCGTCTTCGAATCATTCATCGTGATCTCAAAGCTAGCAATATTTTATTGGATGCGGAAATGAGTCCAAAGATTGCGGATTTCGGCATGGCAAGATTGTTTGAAGTAGATGAGACACAAGCCAACACAAACAGAATTGTGGGAACTTATGGTTACATGGCTCCAGAGTATGCAATGCAAGGTCAATTTTCCGTAAAATCAGATGTCTATAGCTTCGGAGTTTTGGTTCTTGAAATTGTGAGTGGCCAAAAAAACAATTGTTTTCGCAATGGAGAGACGGTGGAAGATCTTATAAGCGTTGCATGGAAGAATTGGAGGGCAGGAACAAGTGCAAATGTGATAGATACAGCACTAAGTTCAGGTTCAAGGAATGAAATGATAAGATGTATTCACATTGGGTTATTATGTGTTCAAGAGAATGCAGCAGATAGGCCAACAATGGCTTCAGTGGTTCTTATGCTAAACAGCCATTCCCTGACCCTCCCAGTCCCATATGAACCAGCATTCTTCATGCACAGTAATATCGATGAATCCGGCACATCGTCAAAGCCGGATCGTTGGTTAGAGATGACTCGATCTAGTCATGATTCCAAAAGCACACCCCTTCAACCTTCAGAAAATGAAGCTTCAGTTACTGATCTTTATCCTCGCTAG 2052 42.11 MEMATSRKLFFFLFILLATVCATICQPDFVTHSCSSDRGNYTTNSPFRQNLDSLLSSISTSTQLMNSGFYNSSSGQEPDRVNVMALCRGDFSVQDCRNCLNDSTRKILEVCPNEKEGIGWYNDCMLRYSNTSIFGVLNTGGFFNAFNTGNSSDPTGFTQALRNLMDRLRQVAASGDSLRKFAVGEIAAPNFDTIYGLIQCTPDLSSLNCNNCILRLVSSITVGSLGARIFTTSCNLRYEIELFYNLPAPPPPPPPTADGGPSSLPPPLQPPTTENNGNAARTAAIVIVSTVVPTILVIGICIFLRMRRRKHKKSSENVESSAFREADDEISSVEMLQYDFATIKVATNDFSNENKLGQGGFGAVYKGKLSNGQNIAVKRLSRDSGQGDLEFKNEVLLVAKLQHRNLVRLLGFCLERSERLLIYEFVPNASLDQFIFDFTKRTLLDWERRFKIISGVARGLLYLHEDSRLRIIHRDLKASNILLDAEMSPKIADFGMARLFEVDETQANTNRIVGTYGYMAPEYAMQGQFSVKSDVYSFGVLVLEIVSGQKNNCFRNGETVEDLISVAWKNWRAGTSANVIDTALSSGSRNEMIRCIHIGLLCVQENAADRPTMASVVLMLNSHSLTLPVPYEPAFFMHSNIDESGTSSKPDRWLEMTRSSHDSKSTPLQPSENEASVTDLYPR 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 36314699 36317348 + evm.model.ptg000014l.364 HCH14g0844 558747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0844 683 MobiDBLite consensus disorder prediction 249 276 - -
HCH14g0844 683 MobiDBLite consensus disorder prediction 660 676 - -
HCH14g0844 683 Gene3D Transferase(Phosphotransferase) domain 1 426 627 - -
HCH14g0844 683 SUPERFAMILY Protein kinase-like (PK-like) 338 658 IPR011009 -
HCH14g0844 683 CDD STKc_IRAK 356 621 - -
HCH14g0844 683 CDD TM_EGFR-like 282 313 - -
HCH14g0844 683 Pfam Protein tyrosine and serine/threonine kinase 353 617 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0844 683 Gene3D Phosphorylase Kinase; domain 1 324 425 - -
HCH14g0844 683 FunFam Cysteine-rich receptor-like protein kinase 10 308 425 - -
HCH14g0844 683 ProSiteProfiles Protein kinase domain profile. 350 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0844 683 MobiDBLite consensus disorder prediction 642 683 - -
HCH14g0844 683 ProSiteProfiles Gnk2-homologous domain profile. 139 243 IPR002902 -
HCH14g0844 683 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 80 636 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
HCH14g0844 683 MobiDBLite consensus disorder prediction 249 272 - -
HCH14g0844 683 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524(InterPro)
HCH14g0844 683 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
HCH14g0844 683 FunFam Cysteine-rich receptor-like protein kinase 10 142 243 - -
HCH14g0844 683 FunFam Cysteine-rich receptor-like protein kinase 28 426 628 - -
HCH14g0844 683 Gene3D - 140 243 IPR038408 -
HCH14g0844 683 Gene3D - 26 132 IPR038408 -
HCH14g0844 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0844 683 Pfam Salt stress response/antifungal 149 239 IPR002902 -
HCH14g0844 683 Pfam Salt stress response/antifungal 34 130 IPR002902 -
HCH14g0844 683 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 133 - -
HCH14g0844 683 SMART serkin_6 350 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0842 HCH-Chr14:36302300 HCH14g0844 HCH-Chr14:36314699 3.60E-233 dispersed
HCH14g0844 HCH-Chr14:36314699 HCH3g0567 HCH-Chr3:3802780 6.00E-196 dispersed
HCH14g0843 HCH-Chr14:36309563 HCH14g0844 HCH-Chr14:36314699 2.80E-66 tandem
HCH14g0844 HCH-Chr14:36314699 HCH14g0845 HCH-Chr14:36317862 3.80E-118 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81245 PF07714 PK_Tyr_Ser-Thr 1.60E-47 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0844 - - - 0.0