Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0845 ATGTTTCATTTCCTCAATCTCAGAGCTTCACCATCATTTCCATTTTTTCTTCTACTTCTGATCTCATTTTCTGGATTAATTAGCTCCCATCATTTTGAACCAACTTACAATTCCCACATCTGTGATAACACAGCCAACTCTAATCTCAATTCCAATCGCAATTCTCTACTAAATTCCCTATCTGAAGCTTCCTCAGACAGCTTCTACAACCGGACTTTCAATGGAATTTACGGCCTCGTCCTCTGCAGAGGAGATGTTTCCACTGATAACTGTCATAGTTGTGTCACCACTGCAAGAAATGAAATAAAACAACGATGCCCTTTGAGTGTCAATGCAACAATATGGTTTGAAGAGTGCATGATGAGATATTCAAACACAAACTTTTTAGGGACAGTAGAGTTGTCACCAAAATTTATCATGGGAAATTCTGAAAACAACAGCACATCCTCTGATGATCCTAGTATTGATGGAATTGCTTTGTTGTCTGAATTGGTGAGTGAAGCTGTAAGATCAGAGATGTTGTTTGCAGCAAAGAGATTGGATAAAAGAGCGGCACGATACGGATTGGTGCAGTGTACAAGGGATATCAATAATAGAGATTGTAGTATTTGTTTGACAAGTTTGTTGGAGGAGATGAGGCAGTTTTATAGAGGGAAAGTGGGGTGGAGAATTTTGAGTCCAAGCTGTAATATAAGATATGAGCAAAATGTTTTCTATCAGCAGTCAGATGGTTCACAGACTAAAGGATTGAGAAAAGGAATGATCATACTCATTACCTTATCAACAGTAGCAGCAGTAGCATTCCTATCATGCCTATTGTGTTATTTATTTTTATGGAGGAAGAGAAGGCAAGAGCCGGACACAAGTGAAGAAATTTGGTTGCAAAAACTGGACTATTCCAAGTCTGCACAATTGATGAAGCAAGATTTGAGTTCAAGACATGATGATAATGATGGAGAAATGCATTACTTCAGTTTCATTACCCTGCAGACTTCAACAAACAACTTTTCTGATGCGAATCGACTCGGAGAAGGAGGTTTTGGTCCAGTTTACAAGGGAAAGTTGATCAACGGGGAAGAAATAGCAGTAAAAAGACTGTCGGTGAAGTCGAATCAAGGTCATGATGAGTTCAAGAATGAAGTCATGGTAATAATGAAGCTTCAACATAAAAATCTGGTCAGGCTTTTGGGATGCTGCCTGGAGGGAGAGGAAAAGCTTCTTGTATATGAGTACATGGCAAATACTAGTCTAGATGCCTTCTTATTTGATCCAATTAAATGCAAACAACTCGATTGGCTTAAGCGCTCAAACATTGTCAATGGGATTGCAAGAGGAATCTTATATCTACATGAAGATTCTCGACTTAAAATCATTCACAGGGATTTGAAAGCTAGCAATGTATTATTGGACGATGAGATGAATGCGAAGATATCAGACTTTGGAACTGCAAGGATTTTTGGAGGCAAGCAAATTGAGGCTAGCACCAACAGAGTTGTTGGTACTTACGGATATATGGCGCCCGAGTATGCAATGGAAGGAGTATTTTCAATAAAGTCTGATGTTTACAGTTTTGGAATTCTAATGTTAGAAGTCGTAAGCGGGAGGAAGAACATCGGTTTCTTTAAAGTAGACAATACACAAAACCTTCTATCACAAGCATGGCAACTATGGAATGAAGGCAGAGAACATAAGATGGTTGATCCGAACTTGGTTGGAGATTGTCCTTTAAGTGAGGCTGTGAGATGGATCCAAATTGCTTTGTTGTGTGTACAGGAAGATCCGAATATCAGACCCACCATGTCAACGGTCGTCCTAATGCTCGGGAGCAAATCGATTCGCCTTCCTCACCCATCCAAACCTCCATTTTTTCCTGTTGGGTTTCCCATGTATGATCAATCTTCAACAAGTTTATCTGGGACAGGAGATCTTTACACAGATCAATCCTCTACTACTGCTTCTATCTAG 1965 39.59 MFHFLNLRASPSFPFFLLLLISFSGLISSHHFEPTYNSHICDNTANSNLNSNRNSLLNSLSEASSDSFYNRTFNGIYGLVLCRGDVSTDNCHSCVTTARNEIKQRCPLSVNATIWFEECMMRYSNTNFLGTVELSPKFIMGNSENNSTSSDDPSIDGIALLSELVSEAVRSEMLFAAKRLDKRAARYGLVQCTRDINNRDCSICLTSLLEEMRQFYRGKVGWRILSPSCNIRYEQNVFYQQSDGSQTKGLRKGMIILITLSTVAAVAFLSCLLCYLFLWRKRRQEPDTSEEIWLQKLDYSKSAQLMKQDLSSRHDDNDGEMHYFSFITLQTSTNNFSDANRLGEGGFGPVYKGKLINGEEIAVKRLSVKSNQGHDEFKNEVMVIMKLQHKNLVRLLGCCLEGEEKLLVYEYMANTSLDAFLFDPIKCKQLDWLKRSNIVNGIARGILYLHEDSRLKIIHRDLKASNVLLDDEMNAKISDFGTARIFGGKQIEASTNRVVGTYGYMAPEYAMEGVFSIKSDVYSFGILMLEVVSGRKNIGFFKVDNTQNLLSQAWQLWNEGREHKMVDPNLVGDCPLSEAVRWIQIALLCVQEDPNIRPTMSTVVLMLGSKSIRLPHPSKPPFFPVGFPMYDQSSTSLSGTGDLYTDQSSTTASI 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 36317862 36320824 - evm.model.ptg000014l.363 HCH14g0845 558748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0845 654 ProSiteProfiles Protein kinase domain profile. 336 623 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0845 654 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 300 411 - -
HCH14g0845 654 Gene3D - 34 128 IPR038408 -
HCH14g0845 654 Gene3D - 139 238 IPR038408 -
HCH14g0845 654 ProSiteProfiles Gnk2-homologous domain profile. 134 238 IPR002902 -
HCH14g0845 654 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 110 623 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
HCH14g0845 654 SUPERFAMILY Protein kinase-like (PK-like) 318 637 IPR011009 -
HCH14g0845 654 FunFam Uncharacterized protein 412 613 - -
HCH14g0845 654 Gene3D Transferase(Phosphotransferase) domain 1 412 614 - -
HCH14g0845 654 SMART serkin_6 336 607 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0845 654 Pfam Salt stress response/antifungal 42 125 IPR002902 -
HCH14g0845 654 Pfam Salt stress response/antifungal 159 235 IPR002902 -
HCH14g0845 654 Gene3D Phosphorylase Kinase; domain 1 310 411 - -
HCH14g0845 654 CDD STKc_IRAK 342 607 - -
HCH14g0845 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0845 654 Pfam Protein tyrosine and serine/threonine kinase 340 605 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0845 654 ProSiteProfiles Gnk2-homologous domain profile. 31 128 IPR002902 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0845 HCH-Chr14:36317862 HCH3g0566 HCH-Chr3:3778950 2.10E-129 dispersed
HCH14g0847 HCH-Chr14:36327798 HCH14g0845 HCH-Chr14:36317862 4.70E-48 dispersed
HCH14g0848 HCH-Chr14:36329777 HCH14g0845 HCH-Chr14:36317862 1.30E-70 dispersed
HCH14g0844 HCH-Chr14:36314699 HCH14g0845 HCH-Chr14:36317862 3.80E-118 tandem
HCH14g0845 HCH-Chr14:36317862 HCH14g0846 HCH-Chr14:36321853 2.30E-205 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81246 PF07714 PK_Tyr_Ser-Thr 1.40E-48 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0845 - - - 0.0