Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0846 ATGATGATCCAAAACGAAGCTATGATCCATGTCCTGAATCGAAGGGGTTGTTCATTTTTACAAATAGTATTCCTTTTCATAATCCCATGTCACTACTCCCAACCTCTTTACCACTTTTGTAATACTAACAACACATCCATTGAGGGACCAAACTCCACTCTGAATTCCAACGTTAACACCCTGTTGGTTTCGTTGTCCTCTAAAGCTGTCTCCAACACCTTCTACAACGAAACCATTAACGGAATCCATGGCCTCTTCCTCTGCCGAGGAGATGTCTCCGGCGAAGACTGTCGTAGCTGTGTCGACAGTGCAACCCATTATATAGAAAGTGTTTGCGCATCAAATACAAGTGGTATTATATGGTATGATAACTGCACTTTGAGATACTCCGTCAGAAACTTCTTTGGGATTCTAGAGATGTCTCCGGCCGTTTTCATGTGGAATATTCGGAACACTACTTCGCCGGATGACCGTAATTACATCGCACTTGCTTTGATCTATGATTTAATAAGCAAAGTAGATTCCAAAACCACGACAGGTGTGATGTTGTACGCGGCAGATGAAAGGACTACGAGCGAGGGGACGAGATATGGCTCCGTACAGTGTACCAGAGATATTAACGAGGTTCAATGTCGACAATGTTTGCAAAGTTTGATCCAATTTAGTGAGACATGTTGCCAAATGCAACGAGGATGGCGACTGATGTACCCAAATTGTAATATGAGGTACGAGGAATACCCTTTCTATGGCGCGTCTCCGTCTCCACCTCCACCTCCACCTCCGCCGATTGATGCTCCGTCTCCGCCTCCGTCTCCTCCTCGGCCTCCGCCTCCGCCTCCGCTGACTGATGGGAATGGAGGGGGGAACACAACAAGAATCATAGCCATCACCATACCAGCAGTTGCAGCATTGGGAATTTTATTAGGACTCTTGTATTATGTATTTTTCTGCAGAAAGAAAAGTCATGAGAGGGATAGAAGTGAAGAATTTCCGTTGCGAAATTCGGATAATTCAAAGTCAGCTCACTTTATGAGGCAAGATTTCCATTCAACAAAGGATGACACTGATGTAGATATGCATTACTTTAGTTTGAGTACTCTGAAGGCTGCCACGGATAACTTTTCGGATGCCAATCGACTTGGAGAAGGCGGTTTTGGTCCAGTTTATAAGGGAAAACTGATTGGTGGAGAGGAAATAGCAGTAAAACGATTATCAGCAAAATCAAGTCAAGGACATGAAGAATTCAAGAATGAAGCAAAGGTAATCTGGAAGCTTCAGCATAAAAATTTGGTCAGGCTCTTGGGATGCTGCCTTGATGGAGACGAAAAGCTTCTGGTCTACGAGTACATGGCAAACACTAGTCTTGATGCTTTCTTGTTTGATCCATTAAAGTGCAAACAACTTGACTGGCTCAAGCGTGAAAACATCGTTAATGGGATTGCGAGAGGGATTCTATATCTCCATGAGGATTCTCGGCTCAAAATCATCCATAGAGATTTGAAAGCAAGCAATGTACTGTTAGATGATGAGATGAATCCAAAGATATCAGACTTTGGAACTGCTAGGATATTTGGAGGCAAGCAAATTGATGCCAGCACCAATAGAATAGTTGGCACATATGGTTATATGGCGCCGGAGTATGCTATGGAGGGACTATTCTCCGTTAAGTCGGATGTATACAGCTTCGGAGTTCTAATGCTAGAGGTCATCAGCGGACGGAAGAGCATCGGATTTTTGAATGTAAACCGAGCAGATAACCTTCTATCTCATGCATGGGAACTGTGGAATGAAGGCAGAGCACAAGAAATGATAGATAAGAACTTGGGTGGAGACTGTCCTATGAGGGAGGCTTTGAAATGGATCCACATTGCCTTGTTATGTGTTCAAGAAGATGCCAACATCAGACCCACCATGTCAATGGTTGTTCTAATGCTTGGAAGTCAATCCACTGCCCTTCCTCAACCATTAAGACCTCCATTTCTTTCAGGTGGGGGAGTTCACATATCTGATCTTTTTTCAACAACTGGAACTGGAACAGGAAGTCTTATCTCTGCATCTTCTTCCCTGTAG 2070 43.72 MMIQNEAMIHVLNRRGCSFLQIVFLFIIPCHYSQPLYHFCNTNNTSIEGPNSTLNSNVNTLLVSLSSKAVSNTFYNETINGIHGLFLCRGDVSGEDCRSCVDSATHYIESVCASNTSGIIWYDNCTLRYSVRNFFGILEMSPAVFMWNIRNTTSPDDRNYIALALIYDLISKVDSKTTTGVMLYAADERTTSEGTRYGSVQCTRDINEVQCRQCLQSLIQFSETCCQMQRGWRLMYPNCNMRYEEYPFYGASPSPPPPPPPPIDAPSPPPSPPRPPPPPPLTDGNGGGNTTRIIAITIPAVAALGILLGLLYYVFFCRKKSHERDRSEEFPLRNSDNSKSAHFMRQDFHSTKDDTDVDMHYFSLSTLKAATDNFSDANRLGEGGFGPVYKGKLIGGEEIAVKRLSAKSSQGHEEFKNEAKVIWKLQHKNLVRLLGCCLDGDEKLLVYEYMANTSLDAFLFDPLKCKQLDWLKRENIVNGIARGILYLHEDSRLKIIHRDLKASNVLLDDEMNPKISDFGTARIFGGKQIDASTNRIVGTYGYMAPEYAMEGLFSVKSDVYSFGVLMLEVISGRKSIGFLNVNRADNLLSHAWELWNEGRAQEMIDKNLGGDCPMREALKWIHIALLCVQEDANIRPTMSMVVLMLGSQSTALPQPLRPPFLSGGGVHISDLFSTTGTGTGSLISASSSL 689
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 36321853 36324732 - evm.model.ptg000014l.362 HCH14g0846 558749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0846 689 SUPERFAMILY Protein kinase-like (PK-like) 355 660 IPR011009 -
HCH14g0846 689 ProSiteProfiles Gnk2-homologous domain profile. 35 134 IPR002902 -
HCH14g0846 689 Pfam Protein tyrosine and serine/threonine kinase 378 642 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0846 689 ProSiteProfiles Gnk2-homologous domain profile. 140 248 IPR002902 -
HCH14g0846 689 Gene3D - 143 248 IPR038408 -
HCH14g0846 689 Gene3D - 32 134 IPR038408 -
HCH14g0846 689 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 153 660 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
HCH14g0846 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0846 689 FunFam Uncharacterized protein 450 651 - -
HCH14g0846 689 Pfam Salt stress response/antifungal 40 131 IPR002902 -
HCH14g0846 689 Pfam Salt stress response/antifungal 168 246 IPR002902 -
HCH14g0846 689 MobiDBLite consensus disorder prediction 251 283 - -
HCH14g0846 689 MobiDBLite consensus disorder prediction 251 288 - -
HCH14g0846 689 Gene3D Phosphorylase Kinase; domain 1 347 449 - -
HCH14g0846 689 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 338 449 - -
HCH14g0846 689 Gene3D Transferase(Phosphotransferase) domain 1 450 653 - -
HCH14g0846 689 CDD STKc_IRAK 380 645 - -
HCH14g0846 689 ProSiteProfiles Protein kinase domain profile. 374 661 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0846 689 SMART serkin_6 374 645 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0846 HCH-Chr14:36321853 HCH3g0567 HCH-Chr3:3802780 1.10E-133 dispersed
HCH9g0130 HCH-Chr9:723123 HCH14g0846 HCH-Chr14:36321853 6.60E-75 dispersed
HCH14g0845 HCH-Chr14:36317862 HCH14g0846 HCH-Chr14:36321853 2.30E-205 tandem
HCH14g0846 HCH-Chr14:36321853 HCH14g0847 HCH-Chr14:36327798 3.60E-72 tandem
HCH8g1079 HCH-Chr8:46661780 HCH14g0846 HCH-Chr14:36321853 3.50E-79 transposed
HCH14g0846 HCH-Chr14:36321853 HCH7g0217 HCH-Chr7:1473068 3.50E-29 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81247 PF07714 PK_Tyr_Ser-Thr 1.00E-47 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0846 - - - 0.0