Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0858 ATGGGTACTGCATGCAAAAAAATTTGTGGTTTTTTACTATTTTCATCGTTCATTTTCTTCTTCTTTAACTCTCTAGTTTCTGAAGCTGCAGATTCACTTCAGAAAAATGAATCTTTAAGCAACAACCAGTTCCTCATATCTACAAATGAGTTCTTTGAAATGGGATTCTTCAACCCCACAAATTCTTCATCATGGTATCTAGGAATATGGTATTACAGAATAGAAAGAACTTATATTTGGGTTGCAAATAGAAACAAGCCACTTCCTAATAGAGATGGGATTTTGAAATTTGGTGATGATGGAAATTTGGTTCTTTTAGACAGCAACAACGTCTCTGTTTGGAAAAGTAATGTTTCTTCAGTTAATATGTCGGATCCGACAACACTGAAACTTAGTAACGAAGGAGAATTAATTCTCTCGAGCAGAGAAAACGACAGGAGAATTTATTGGAGCAGCTTTCAGAATCCGACGGATACTTTTTTACCGAACATGAAAGTGAAGATTAACTCAACAGCAGGGGAGAATAGAATGTTTTTTTCATGGAAATCAGAGAATGATCCTTCAACAGGGAATTTCTGTCTGGGAATTGATCCACGTGCGGCACTGCAGATTGTGATTTGGAACAGAGAAAATAGATGGTGGAGAAGTGGTCATTGGGATCGGCAGAGGTTTTCTGGGGTACCAGCTATGCGTGCTACTTCATGGTATGGTTTTACAGTTTCATCTGATGAATTGACTTATCATCCTTTAACTAGTTCTGATAAAATAAGGTTTCAAATTCTTTGGAATGGTAAAGAAGAACAGCAAAGATGGGATGAAAGGAATGGTAGATGGGAGACTATTCAATCATTGCCTAATAACTCTTGTGATTTCTATAATACATGTGGGAATTACGGGGTTTGTGTTGAATCGAATCCGTTACGGTGTGATTGCGTGCCCGGGTTTGTACCTGTGAATGATGAGAGGTGGAGGAGTAGGGATTGGTCTGATGGTTGTAAAAGGAATACTCCATTGCTGAGAAAGAGGGTTAATGGTACTAATGTGAATGGAAGTGAGGGAGTTGAAGATGGTGAGAGAGATGGATTTTTGTCTTTGAATTCTGTGAAGTTGCCTGATTTTATGAATCTGGTTCGGTTGGATTTCGGGGAGTTGTGTGTAGATAAATGCTCGAGCAATGATTCGTGCATTGCTTATTCGGAAGCTAATGGGATTGGATGCGGGGTGTGGGATGGACCTTTGATTGATATTCAACAATTTGATGGAGTTAACAATGGGAATACATTGAATGTTCGTGTGGCTCATTCTGATTTGGGATCTGTAGGCAGCGAGAGGAAATTGTCGGTTGCGATGATAGTACTGATCTCTTTAGGAGGAGCAGTTTTCATTGCCTTATTATCGTTGCTGATATGGAAGTTCAAGGGTAAATTGAAAGTCTTGCCTGCTGGTTCTTCAAGTCAACCTCAAAATAACATCGAAGTACCGATTTTCGACATGAGCAAGAGCAGAGAATTTTCCACAGACCTTTCAGGACCATATGAATTAAACATTGAAGGTGAACAAGGAAATGGACCAGAATTGCCATTGTTCAATTTCAACTGTGTAGCTACTGCTACAGATAACTTTTCGGAGGAAAACAAACTCGGGCAGGGAGGTTTCGGTCCGGTATACAAGGGAAAGCTTCCGAGTGGACAAGAAATTGCTGTGAAGAGGCTCTCAGTGAAGTCTGGCCAGGGTCTGGAAGAGTTTAAAAATGAGATTATACTGATAGCAAAGTTGCAGCATCGAAATCTCGTTAGACTATTGGGCTACTGCATTCAAGGGGAGGATAAGATGCTGCTCTATGAATATATGCCAAACAAAAGCTTGGATTGGTTTCTTTTTGATCCAGTTAAACGGGCACTACTAGATTGGAGAACACGGTTATCAATCATTGAAGGAATTGCACGAGGGCTTCTATACCTTCACCGAGACTCGAGACTTCGAATCATTCATAGAGATTTGAAGGCCAGCAACATTTTGCTGGATGAAGACATGAATCCAAAAATATCAGACTTTGGCATGGCTAGAATATTTGGGGGAAACCAGAATGAGGCCAATACACTTCGAGTCGTTGGCACATACGGGTACATGGCCCCAGAATATGCAATGGAAGGTCTATTTTCAGTTAAATCAGATGTCTATAGTTTTGGTGTATTATTGTTGGAACTCATATGTGGTCGGAGAAACATTAGCTTTCGCTCCACCGAATATTTGACTATAATCGGTTATGCTTGGCAACTTTGGAACCAAGGAAAAGCGATGGAACTTCTCGATCCCTCAATTAAAGATTCAAGTCCCGAGAATGAAGTAATGAAATGCATACATGTGGGGATGTTGTGTGTACAAGACTCCCCAGCTTTCAGACCAACAATGCAGTCCTTGGTGTTAATGCTGGAAAGTGAATCTACATCTCTGCAACCACCTAGACAGCCCACTTTTACTTCGACCAGAGCCTCCATCGATACCGACTTGTTTACAGAAGGCCACGACATCGCTTCGTCCAATGATGTAACGATAACAAGTTTAGATGGGAGATAG 2577 40.63 MGTACKKICGFLLFSSFIFFFFNSLVSEAADSLQKNESLSNNQFLISTNEFFEMGFFNPTNSSSWYLGIWYYRIERTYIWVANRNKPLPNRDGILKFGDDGNLVLLDSNNVSVWKSNVSSVNMSDPTTLKLSNEGELILSSRENDRRIYWSSFQNPTDTFLPNMKVKINSTAGENRMFFSWKSENDPSTGNFCLGIDPRAALQIVIWNRENRWWRSGHWDRQRFSGVPAMRATSWYGFTVSSDELTYHPLTSSDKIRFQILWNGKEEQQRWDERNGRWETIQSLPNNSCDFYNTCGNYGVCVESNPLRCDCVPGFVPVNDERWRSRDWSDGCKRNTPLLRKRVNGTNVNGSEGVEDGERDGFLSLNSVKLPDFMNLVRLDFGELCVDKCSSNDSCIAYSEANGIGCGVWDGPLIDIQQFDGVNNGNTLNVRVAHSDLGSVGSERKLSVAMIVLISLGGAVFIALLSLLIWKFKGKLKVLPAGSSSQPQNNIEVPIFDMSKSREFSTDLSGPYELNIEGEQGNGPELPLFNFNCVATATDNFSEENKLGQGGFGPVYKGKLPSGQEIAVKRLSVKSGQGLEEFKNEIILIAKLQHRNLVRLLGYCIQGEDKMLLYEYMPNKSLDWFLFDPVKRALLDWRTRLSIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEDMNPKISDFGMARIFGGNQNEANTLRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLELICGRRNISFRSTEYLTIIGYAWQLWNQGKAMELLDPSIKDSSPENEVMKCIHVGMLCVQDSPAFRPTMQSLVLMLESESTSLQPPRQPTFTSTRASIDTDLFTEGHDIASSNDVTITSLDGR 858
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 36383985 36387262 - evm.model.ptg000014l.350 HCH14g0858 558761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0858 858 CDD B_lectin 36 156 IPR001480 -
HCH14g0858 858 Pfam PAN-like domain 358 416 IPR003609 -
HCH14g0858 858 Pfam Protein tyrosine and serine/threonine kinase 544 809 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0858 858 SUPERFAMILY Protein kinase-like (PK-like) 526 836 IPR011009 -
HCH14g0858 858 Pfam D-mannose binding lectin 77 182 IPR001480 -
HCH14g0858 858 SMART serkin_6 541 811 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0858 858 CDD STKc_IRAK 547 812 - -
HCH14g0858 858 Gene3D Transferase(Phosphotransferase) domain 1 617 826 - -
HCH14g0858 858 SMART blect_4 36 156 IPR001480 -
HCH14g0858 858 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 617 819 - -
HCH14g0858 858 Gene3D - 24 154 IPR036426 -
HCH14g0858 858 CDD PAN_AP_plant 355 433 - -
HCH14g0858 858 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
HCH14g0858 858 ProSiteProfiles Bulb-type lectin domain profile. 30 152 IPR001480 -
HCH14g0858 858 ProSiteProfiles Protein kinase domain profile. 541 826 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0858 858 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 485 616 - -
HCH14g0858 858 PIRSF SRK 4 858 IPR024171 GO:0004674(InterPro)
HCH14g0858 858 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 21 824 - -
HCH14g0858 858 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 187 IPR036426 -
HCH14g0858 858 Pfam S-locus glycoprotein domain 214 318 IPR000858 GO:0048544(InterPro)
HCH14g0858 858 CDD EGF 289 315 - -
HCH14g0858 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0858 858 Gene3D Phosphorylase Kinase; domain 1 517 616 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0858 HCH-Chr14:36383985 HCH3g0595 HCH-Chr3:4089088 2.20E-195 dispersed
HCH1g0021 HCH-Chr1:1453031 HCH14g0858 HCH-Chr14:36383985 8.60E-89 transposed
HCH14g0858 HCH-Chr14:36383985 HCH2g0774 HCH-Chr2:51395714 1.50E-111 wgd
HCH14g0858 HCH-Chr14:36383985 HCH3g0586 HCH-Chr3:4014815 1.90E-170 wgd
HCH14g0858 HCH-Chr14:36383985 HCH6g0716 HCH-Chr6:40611922 2.10E-169 wgd
HCH14g0858 HCH-Chr14:36383985 HCH7g0202 HCH-Chr7:1396888 1.90E-159 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81248 PF07714 PK_Tyr_Ser-Thr 2.50E-47 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0858 - - - 0.0