Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0886 ATGGGTCCTGCAAATTGGACCTTCTACTTGTGGATCCTTGTTGGATTGCTGTTGGTCTCCTTGAAGTCTTTTAGTTTCGGAGACACCGATATTCGTGATGTCATTGCAACCAATGCATTATTTATTTCTCTTGGCTACCCTCCTCTGCGAGGGTGGATTCTTGTCGGAGGTGATCCGTGTGGGGAGAAGTGGCAAGGGATTGAATGCGTGTTCTCAAATATAACAGCAATACAACTAAGTGGCTTGAATTTGGGAGGAGAGCTCGGCAACAACTTGGCACTATTTGAATCGATTATATCTATTGATCTTAGCAACAACCATATTGGAGGGAACATTCCGTCAATATTGCCCACGACACTAAGAAATTTTTCTTTATCGACTAATCAATTCACTGGAAGCATTCCAGCTGCATTGTCCTCATTAACACAACTAGTAGACTTGTCATTAAACGACAACCTTCTTACTGGAGTAATACCTGATGCCTTTCAGCAGCTTAATGGCTTAAATAACTTGGACCTTTCTGGCAACCGTTTGAGTGGCCAGCTGCCTCCTTCGGTGGCTGCTTTGTTCTTTCTTACTACATTGCACTTGCAGAACAATCAACTTTCCGGGATGCTTGATGTTCTACAGGATCTTCCACTGTTTGATTTGAATATAGAGAACAATCTTTTTTCTGGACCTATACCTGCAAAGTTATTGAATATTCCAAATTTCAGAAAAGATGGGAATCCTTTTAATACTACCATAATTCCATCTGCTCCTACTTTAGCCCCTTCACCTTTTGCTGTGGCCCCAATTACTATGGAAAAACCAGACAAACAGGCAAATGGACCAACTACTTCAGAAACTGCCAAATCAGATGGAGCAAGGAGCTTTTTTACTGCTAAGCGGGTCACTTGGATTGCAATTATTGGGGTTATAATATTAATTGCATTGTTATTTTGTCTTATTATGTCAATCTGCCTGAAAAGAAATAAACATCGAGAAGACACCAAGATGGTTCATGATGGTGCTGATATGGCTTATAAATATAAGCCTAAATCCAGACAGTCCTCACCTAAAATGAATAATGACATTGAGAATGCTCAAAAGGAAAGCGTTCTTAAGCCAAGGCTACATGATAGACAGGAGACAGATGGGAAGAGACAAGGTACTTTTAGTATGACATCTAATAAAGACCATGGAAAGGGGATTATAGATGTGAGCACAAATAGTTTCACAGCACCGCGTCCTCCCCCTCCCCTTCCTCTCCTTTCAACTGAGGAGATTATAAAACCTATCGCCGCAGCTGAAATATCTAGCAAATTGCCTGCTAGAAAATTGAATTCAAGCTCTTTGAAAGTTTTCACAGTTGCATCACTTCAGCAGTACACAAATAGTTTCTCTGAAGATAGTCTTCTTGGAACCGGCATGCTTGGCAGTGTCTATAGAGCTGAACTTCCAGATGGAAGGCTGCTGGCTGTTAAAAAACTGGCAAGCACCTCTTTGATGCAACAGAGTGATGATGAATTTCATGACCTTGTAACTAATATCTGTAAATTTCGCCATGATAATATTTTGGAGCTTGTGGGTTACTGTGTTGAGCATGGACAGCGTTTACTCGTATATAAGTATTGTAAAAATGGTACACTTTATGATGCACTGCATATGGACGAGGAGATGCATCAAAAGCTTTCATGGAATTTGCGAATCAAGATTGCACTTCAAGCTGCAAGAGCTTTAGAGTATCTGCATGAGGCTTGTCAGCCACCTATCATGCACCAAAATTTCAAGTCTGCCAATATTCTCTTAGACAGTGAGCTAAACGTGCATGTCTCTGACTCTGGCCTCACTTCGCTGCTTTTATCTGGTTCTGCAAATCAGTTGTCCGTGCGCCACCTCACGGCTCATGGTTATAGCCCTCCCGAATTTGAGTCAGGAACTTACACTTATCAAAGTGATATTTATAGCTTTGGAGTTGTAATGTTAGAACTCCTCACTGGGCGGAAGTCGTGTGACCGATCACGACCTCGAGGAGAGCAATTTCTTGTTAGATGGGCTGTTCCACGGCTCCATGATATCGATGCATTATCAAGAATGGTGGATCCATCTCTTAATGGCTTGTATCCTATCAAGTCATTATCACGCTTTGCCGATATAGTTTCTGCATGCATACTGCGAGAGCCAGAATTTAGGCCACCAATCTCTGAAATTGTACAGGAGCTCTTACAAATGCTTTAA 2220 41.53 MGPANWTFYLWILVGLLLVSLKSFSFGDTDIRDVIATNALFISLGYPPLRGWILVGGDPCGEKWQGIECVFSNITAIQLSGLNLGGELGNNLALFESIISIDLSNNHIGGNIPSILPTTLRNFSLSTNQFTGSIPAALSSLTQLVDLSLNDNLLTGVIPDAFQQLNGLNNLDLSGNRLSGQLPPSVAALFFLTTLHLQNNQLSGMLDVLQDLPLFDLNIENNLFSGPIPAKLLNIPNFRKDGNPFNTTIIPSAPTLAPSPFAVAPITMEKPDKQANGPTTSETAKSDGARSFFTAKRVTWIAIIGVIILIALLFCLIMSICLKRNKHREDTKMVHDGADMAYKYKPKSRQSSPKMNNDIENAQKESVLKPRLHDRQETDGKRQGTFSMTSNKDHGKGIIDVSTNSFTAPRPPPPLPLLSTEEIIKPIAAAEISSKLPARKLNSSSLKVFTVASLQQYTNSFSEDSLLGTGMLGSVYRAELPDGRLLAVKKLASTSLMQQSDDEFHDLVTNICKFRHDNILELVGYCVEHGQRLLVYKYCKNGTLYDALHMDEEMHQKLSWNLRIKIALQAARALEYLHEACQPPIMHQNFKSANILLDSELNVHVSDSGLTSLLLSGSANQLSVRHLTAHGYSPPEFESGTYTYQSDIYSFGVVMLELLTGRKSCDRSRPRGEQFLVRWAVPRLHDIDALSRMVDPSLNGLYPIKSLSRFADIVSACILREPEFRPPISEIVQELLQML 739
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 36578168 36582743 - evm.model.ptg000014l.322 HCH14g0886 558789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0886 739 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 256 - -
HCH14g0886 739 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 428 538 - -
HCH14g0886 739 MobiDBLite consensus disorder prediction 364 381 - -
HCH14g0886 739 Gene3D Phosphorylase Kinase; domain 1 425 538 - -
HCH14g0886 739 SUPERFAMILY Protein kinase-like (PK-like) 440 735 IPR011009 -
HCH14g0886 739 PANTHER LEUCINE RICH REPEAT KINASE 2 71 737 IPR051420 -
HCH14g0886 739 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515(InterPro)
HCH14g0886 739 Gene3D Ribonuclease Inhibitor 43 256 IPR032675 -
HCH14g0886 739 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 539 739 - -
HCH14g0886 739 MobiDBLite consensus disorder prediction 363 389 - -
HCH14g0886 739 Pfam Protein tyrosine and serine/threonine kinase 465 735 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0886 739 Gene3D Transferase(Phosphotransferase) domain 1 539 739 - -
HCH14g0886 739 SUPERFAMILY L domain-like 41 238 - -
HCH14g0886 739 ProSiteProfiles Protein kinase domain profile. 461 739 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0886 739 Pfam Leucine Rich Repeat 98 116 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0886 HCH-Chr14:36578168 HCH6g0029 HCH-Chr6:457729 1.10E-121 dispersed
HCH14g0886 HCH-Chr14:36578168 HCH7g0172 HCH-Chr7:1136776 1.10E-179 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81249 PF07714 PK_Tyr_Ser-Thr 3.70E-37 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0886 - - - 0.0