Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0919 ATGGATGAAGCGCCTAATTCTTGGCTTAGGAGAACTAAGTTTTCTCACACAATCTATCATCGATGGGATTCTGTGAAATTGAATTCTGTTCCTTTCACCATCGATCCGCCTAGCAATTCCGGCTTGAAATCGAGGCCTCAATCGGCTACAACATCGGTTCAGAAACCGAATCCTAATGTTTCAGAGATTCATCGCAATTTCATTACCAACAAGCAGAGGTCTCTGTCTCCTCTTCCTGAGACCAAGCTTTCTGATGCATTTAAGGAAGCCAAATCGGATAGTAAGCGATTCTCAACTCCGACTCCTCGTGCTAGAGAATCCCATAAGGGATTTAGGAATAAGTTGTTTAGTAAGGATAAGGATCCTCATGATTCAAAAGTGCCCAATTTAATGCCGTCCTTGAATACTAGTCCCATGAAGCACATGGCTTCGGTTAAAGGTAGCGGCGATAAGTTGAAGTTTCGAAAGGATTCGTCTTGGACCAAATATTTTGAGTCTGGTGGGGGGAGAGTGACTGCTGTGGAAACAGAAGATGAATGGAGTGTTGATCTTTCAAAGTTGTTTCTTGGGTTGAGGTTTGCTCATGGGGCTCATAGTCGTCTTTACCATGGGAAATACAATGATGAACCTGTGGCTGTTAAAATTATTAGAGTGCCTGATGATGATGAAAATGGAGCTCTTGCTGCTCGTTTGGAGAAGCAATTCAATAGAGAAGTTACCCTTTTATCTTGTCTCCACCATCCTAATGTAATAAAGTTTGTAGCTGCTTGTAGAAAGCCACCAGTTTATTGTGTCATAACTGAATATCTGTCTCAAGGATCCTTGAGGGCATATTTACACAAACTCGAGCACCAATCTCCTCCCATGCGAAAACTGATTGAAATTGCTCTAGATGTTGCTCGTGGAATGGAATACATTCATTCTCAAGGTCTGATTCATCGGGACCTTAAGCCTGAGAACGTTCTTATTGATGAGGATTTCCACCTGAAAGTTGCCGATTTTGGTATCGCTTGTCCTGAGGCATATTTTGACCCATTGACTGATGATCCCGGGACTTATCGATGGATGGCACCGGAGATGATCAAACATAAACCCTATGGCCGGAAGGTTGATGTGTACAGTTTTGGACTTATCTTGTGGGAAATGGTGGCCGGTACAATTCCCTACGAGGATATGACTCCCATACAAGCTGCTTTTGCTGTTGTAAATAAGAATCTTAGACCTGTTATCTCAAGTGATTGTCCGTTGGCAATGCGCGCTTTAATAGAACAATGTTGGTCCTTGCAACCGGATAAGAGGCCCGAGTTCTGGCAGGTTGTGAAGGTATTAGAGAAGTTTGAGTCCTCAATTGCCCATGATGGAACATTGAATTTAATAGAGAATCCCTTATCCAGCTTCCAAGATCATAAGAAAGGGCTTCGCCATTGGATTCAGAAGCTTGGCCCTCTGCATCATCATGAAACTTCACCTGTGCCTAAACCAAAATTCATATGA 1494 42.84 MDEAPNSWLRRTKFSHTIYHRWDSVKLNSVPFTIDPPSNSGLKSRPQSATTSVQKPNPNVSEIHRNFITNKQRSLSPLPETKLSDAFKEAKSDSKRFSTPTPRARESHKGFRNKLFSKDKDPHDSKVPNLMPSLNTSPMKHMASVKGSGDKLKFRKDSSWTKYFESGGGRVTAVETEDEWSVDLSKLFLGLRFAHGAHSRLYHGKYNDEPVAVKIIRVPDDDENGALAARLEKQFNREVTLLSCLHHPNVIKFVAACRKPPVYCVITEYLSQGSLRAYLHKLEHQSPPMRKLIEIALDVARGMEYIHSQGLIHRDLKPENVLIDEDFHLKVADFGIACPEAYFDPLTDDPGTYRWMAPEMIKHKPYGRKVDVYSFGLILWEMVAGTIPYEDMTPIQAAFAVVNKNLRPVISSDCPLAMRALIEQCWSLQPDKRPEFWQVVKVLEKFESSIAHDGTLNLIENPLSSFQDHKKGLRHWIQKLGPLHHHETSPVPKPKFI 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 36800481 36803159 - evm.model.ptg000014l.289 HCH14g0919 558822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0919 497 Gene3D Transferase(Phosphotransferase) domain 1 272 477 - -
HCH14g0919 497 FunFam serine/threonine-protein kinase HT1 272 464 - -
HCH14g0919 497 FunFam Serine/threonine-protein kinase isoform 1 177 271 - -
HCH14g0919 497 MobiDBLite consensus disorder prediction 85 148 - -
HCH14g0919 497 PANTHER SERINE-THREONINE PROTEIN KINASE 76 444 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
HCH14g0919 497 MobiDBLite consensus disorder prediction 36 59 - -
HCH14g0919 497 Gene3D Phosphorylase Kinase; domain 1 176 271 - -
HCH14g0919 497 ProSiteProfiles Protein kinase domain profile. 187 446 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0919 497 CDD STKc_MAP3K-like 194 443 - -
HCH14g0919 497 Pfam Protein tyrosine and serine/threonine kinase 194 443 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0919 497 SMART serkin_6 187 450 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0919 497 SUPERFAMILY Protein kinase-like (PK-like) 172 443 IPR011009 -
HCH14g0919 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0919 497 PRINTS Tyrosine kinase catalytic domain signature 267 280 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0919 497 PRINTS Tyrosine kinase catalytic domain signature 351 361 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0919 497 PRINTS Tyrosine kinase catalytic domain signature 414 436 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0919 497 PRINTS Tyrosine kinase catalytic domain signature 370 392 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0919 497 PRINTS Tyrosine kinase catalytic domain signature 305 323 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0919 497 MobiDBLite consensus disorder prediction 85 126 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0919 HCH-Chr14:36800481 HCH3g0334 HCH-Chr3:2105615 3.30E-95 dispersed
HCH10g0190 HCH-Chr10:1558820 HCH14g0919 HCH-Chr14:36800481 2.80E-79 transposed
HCH14g0919 HCH-Chr14:36800481 HCH3g0654 HCH-Chr3:4562086 8.50E-192 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81250 PF07714 PK_Tyr_Ser-Thr 9.40E-59 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0919 - - - 0.0