Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH14g0919 | ATGGATGAAGCGCCTAATTCTTGGCTTAGGAGAACTAAGTTTTCTCACACAATCTATCATCGATGGGATTCTGTGAAATTGAATTCTGTTCCTTTCACCATCGATCCGCCTAGCAATTCCGGCTTGAAATCGAGGCCTCAATCGGCTACAACATCGGTTCAGAAACCGAATCCTAATGTTTCAGAGATTCATCGCAATTTCATTACCAACAAGCAGAGGTCTCTGTCTCCTCTTCCTGAGACCAAGCTTTCTGATGCATTTAAGGAAGCCAAATCGGATAGTAAGCGATTCTCAACTCCGACTCCTCGTGCTAGAGAATCCCATAAGGGATTTAGGAATAAGTTGTTTAGTAAGGATAAGGATCCTCATGATTCAAAAGTGCCCAATTTAATGCCGTCCTTGAATACTAGTCCCATGAAGCACATGGCTTCGGTTAAAGGTAGCGGCGATAAGTTGAAGTTTCGAAAGGATTCGTCTTGGACCAAATATTTTGAGTCTGGTGGGGGGAGAGTGACTGCTGTGGAAACAGAAGATGAATGGAGTGTTGATCTTTCAAAGTTGTTTCTTGGGTTGAGGTTTGCTCATGGGGCTCATAGTCGTCTTTACCATGGGAAATACAATGATGAACCTGTGGCTGTTAAAATTATTAGAGTGCCTGATGATGATGAAAATGGAGCTCTTGCTGCTCGTTTGGAGAAGCAATTCAATAGAGAAGTTACCCTTTTATCTTGTCTCCACCATCCTAATGTAATAAAGTTTGTAGCTGCTTGTAGAAAGCCACCAGTTTATTGTGTCATAACTGAATATCTGTCTCAAGGATCCTTGAGGGCATATTTACACAAACTCGAGCACCAATCTCCTCCCATGCGAAAACTGATTGAAATTGCTCTAGATGTTGCTCGTGGAATGGAATACATTCATTCTCAAGGTCTGATTCATCGGGACCTTAAGCCTGAGAACGTTCTTATTGATGAGGATTTCCACCTGAAAGTTGCCGATTTTGGTATCGCTTGTCCTGAGGCATATTTTGACCCATTGACTGATGATCCCGGGACTTATCGATGGATGGCACCGGAGATGATCAAACATAAACCCTATGGCCGGAAGGTTGATGTGTACAGTTTTGGACTTATCTTGTGGGAAATGGTGGCCGGTACAATTCCCTACGAGGATATGACTCCCATACAAGCTGCTTTTGCTGTTGTAAATAAGAATCTTAGACCTGTTATCTCAAGTGATTGTCCGTTGGCAATGCGCGCTTTAATAGAACAATGTTGGTCCTTGCAACCGGATAAGAGGCCCGAGTTCTGGCAGGTTGTGAAGGTATTAGAGAAGTTTGAGTCCTCAATTGCCCATGATGGAACATTGAATTTAATAGAGAATCCCTTATCCAGCTTCCAAGATCATAAGAAAGGGCTTCGCCATTGGATTCAGAAGCTTGGCCCTCTGCATCATCATGAAACTTCACCTGTGCCTAAACCAAAATTCATATGA | 1494 | 42.84 | MDEAPNSWLRRTKFSHTIYHRWDSVKLNSVPFTIDPPSNSGLKSRPQSATTSVQKPNPNVSEIHRNFITNKQRSLSPLPETKLSDAFKEAKSDSKRFSTPTPRARESHKGFRNKLFSKDKDPHDSKVPNLMPSLNTSPMKHMASVKGSGDKLKFRKDSSWTKYFESGGGRVTAVETEDEWSVDLSKLFLGLRFAHGAHSRLYHGKYNDEPVAVKIIRVPDDDENGALAARLEKQFNREVTLLSCLHHPNVIKFVAACRKPPVYCVITEYLSQGSLRAYLHKLEHQSPPMRKLIEIALDVARGMEYIHSQGLIHRDLKPENVLIDEDFHLKVADFGIACPEAYFDPLTDDPGTYRWMAPEMIKHKPYGRKVDVYSFGLILWEMVAGTIPYEDMTPIQAAFAVVNKNLRPVISSDCPLAMRALIEQCWSLQPDKRPEFWQVVKVLEKFESSIAHDGTLNLIENPLSSFQDHKKGLRHWIQKLGPLHHHETSPVPKPKFI | 497 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 36800481 | 36803159 | - | evm.model.ptg000014l.289 | HCH14g0919 | 558822 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH14g0919 | 497 | Gene3D | Transferase(Phosphotransferase) domain 1 | 272 | 477 | - | - | |
HCH14g0919 | 497 | FunFam | serine/threonine-protein kinase HT1 | 272 | 464 | - | - | |
HCH14g0919 | 497 | FunFam | Serine/threonine-protein kinase isoform 1 | 177 | 271 | - | - | |
HCH14g0919 | 497 | MobiDBLite | consensus disorder prediction | 85 | 148 | - | - | |
HCH14g0919 | 497 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 76 | 444 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
HCH14g0919 | 497 | MobiDBLite | consensus disorder prediction | 36 | 59 | - | - | |
HCH14g0919 | 497 | Gene3D | Phosphorylase Kinase; domain 1 | 176 | 271 | - | - | |
HCH14g0919 | 497 | ProSiteProfiles | Protein kinase domain profile. | 187 | 446 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g0919 | 497 | CDD | STKc_MAP3K-like | 194 | 443 | - | - | |
HCH14g0919 | 497 | Pfam | Protein tyrosine and serine/threonine kinase | 194 | 443 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH14g0919 | 497 | SMART | serkin_6 | 187 | 450 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g0919 | 497 | SUPERFAMILY | Protein kinase-like (PK-like) | 172 | 443 | IPR011009 | - | |
HCH14g0919 | 497 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 311 | 323 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH14g0919 | 497 | PRINTS | Tyrosine kinase catalytic domain signature | 267 | 280 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH14g0919 | 497 | PRINTS | Tyrosine kinase catalytic domain signature | 351 | 361 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH14g0919 | 497 | PRINTS | Tyrosine kinase catalytic domain signature | 414 | 436 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH14g0919 | 497 | PRINTS | Tyrosine kinase catalytic domain signature | 370 | 392 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH14g0919 | 497 | PRINTS | Tyrosine kinase catalytic domain signature | 305 | 323 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH14g0919 | 497 | MobiDBLite | consensus disorder prediction | 85 | 126 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH14g0919 | HCH-Chr14:36800481 | HCH3g0334 | HCH-Chr3:2105615 | 3.30E-95 | dispersed | |
HCH10g0190 | HCH-Chr10:1558820 | HCH14g0919 | HCH-Chr14:36800481 | 2.80E-79 | transposed | |
HCH14g0919 | HCH-Chr14:36800481 | HCH3g0654 | HCH-Chr3:4562086 | 8.50E-192 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81250 | PF07714 | PK_Tyr_Ser-Thr | 9.40E-59 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH14g0919 | - | - | - | 0.0 |