Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH14g0941 | ATGGAAGAAGTAGGTTCTGCTGCTGCTTCAGATGGGGAGAATCATAATCAGATTAATGATAATATTAACAAAATTAGTAACTCAAGTGAAGGTCTTAGCAAACCTAAGCGTCAGATGAAGACTCCGTTTCAGCTTGAAACCCTAGAGAAAGCCTATGCTTCGGAGACATACCCGTCTGAATCGACGAGGGCTGAGTTATCGGAGAAATTGGGGCTTTCTGATCGGCAATTACAAATGTGGTTTTGTCATAGAAGGTTGAAAGATAAGAAAGAACCGGTTAAGAAACCGCGGAAGATGGTGGCACCAACTTTGCCTGATTCTCCCGTTGATGAATTGAGAGTGGTGGCTGAGCCGGGTAGTGATTACGGGTCTGGGTCTGGGTCGGGTTCGAGCCCGTTTGGTGATGTCGGGCGTAATGTGATGCCTAGAACTGTTGGAGATGATGTGCCAATGATGAGAAGGTATTATGAGCCTTCACGGTCTGTTATGGAACTTAGAGCTATTGCTTGTGTGGAATCTCAATTAGGAGAGCCATTGAGGGAGGATGGACCTATTCTTGGGATTGAATTTGATTCATTGCCACCTGATGCCTTTGGAGCTCCTATAGCGGCAGAACAGCAGAAGCGGTCTGGACATTTGTATGGAGACAAATACGAACAACGTGATACAAAATCAAATAAAGCTACCCCAAGGGCATTTCCTGAATATCCATTTTTTCCAGACCAGTCTAATGTTAGAACTGATGTTTATGGATCAGTTGCCCAATCACATTATCCAGATCCATTAGTTGAGGTTTCAGCAGCCAGGACACCGCCATTCTTATTGGGTCATGAACAATTGAACAGGGGTCATAATTACCATGGTCAGGTCTCAAGGGTTCGTCTTTCGTCTCAACAAGAGAAGCAGGCAGTTGCAATTCCATCACCCGCTGAAGATAACGAATTTGTCCCTGCAAGGGATGCTTTCGCAAATATACGAATGAACGCTCAATTAGATCACACAGTTGTTGGGCCAGAAAATTCTTATGTATTTTCTGATGGGCACATCTTTCCTAATGAAGCCATCGTGAGGTTGGAAAGGAAACGCAAGAGTGAAGACACTCGCATTGCCAAAGAAGTTGAGGTCAATGAGATACGAATTCGAAAAGAGCTTGAGAAACAAGATATTATGAGGAGAAAGAGTGAAGAGCGAATGAAGAAAGAAATGGAAAAGCAAGATCGTGAAAGAAAGAAAGAAGAGGAAAAGTTGGTGCGTGAAAGGCAGCGGGAAGCAGAGAGATTGAAGCGTGAGGAAAGACGTGAACTTGAACGTAAGGAGAAGTTTTTGCAGAAGGAATATTTGAGGGCAGAGAAGAGGATGCAAAAAGAAGCAATTCGCAAAGAGAAGGAAGCAGTAAGACGCAAAGCTGCAATGGAGAAGGCTACTGCTCGTAGAATTGCTCGTGAGTCTATGGAGCTTATTGATGATGAACAGCTGGAATTGATGGAACTGGCTGCTGTAAAAAAAGGATTATCCTCAACAATAAGTCTTGATCTTGACACTTTGCAGAATCTTGAATCATTCAGAGATTTTCTAGGTGCATTCCCACCCAAATCTGTGCAATTGAAAAAACCCTTTAGCATTCAACCTTGGATCAATTCAGAGGAGAACATTGGAAACCTCCTTATGGTCTGGAGATTTTTTATTACATTTTCTGATGTTCTAGAGCTCTGGCCCTTTACTCTTGATGAGTTTGTTCAAGCTCTTCATGATTATGATTCAAGGTTGTTGTGTGAGATTCACATTTGTCTTCTGAGACTGATTATTAAAGATATTGAAGATGTTGCAAGAACACCTTCTTCTGGCTTAGGAATGAATCAGAATGGTGTTGCCAATGCTGGAGGTGGACATCCACAGATCGTTGAAGGGGCATATGCATGGGGGTTTGACATTCGCAACTGGCAGCAACTTTTAAATCCTTTAACTTGGCCTGAAATATTTCGACAACTGGCACTATCAGCTGGATTTGGACCACAGTTGAAGAAAAGGAGTGTGGCATGGCCTGACTTGCATAGTAATGATGAGGGTAAATGTGGTGAGGATATAGTATCTACTCTTCGCAATGGTTCAGCAGCTGAAAATGCATTTGCTATCATGCAAGAGAAAGGTTTATTGGCTCCACGAAGATCTAGGCATCGGCTGACTCCTGGAACTGTCAAGTTTGCCGCTTTTCATGTTCTTTCATTAGAAGGAAGTGATGGGTTAACAGTTCTTGAACTTGCAGAGAAGATTCAGAGATCTGGACTTAGAGATCTCACTACAAGTAAAACACCAGAGGCTTCCATTTCTGTTGCTTTGACGAGGGATACTAAGCTTTTTGAAAGAATAGCTCCTTCCACATATCGTGTGCGAACTCCCTATAGGAAGGATCCTGATGATGCTGAGGAAATACTTTCAGTAGCCAGGAAAAAAATTCAGATATTTCAGAATGGGTTTTTGGCTGGAGAAGATGCTGATGATGTTGAAAGAGACGAAGAATCTGAATGTGATGATGTCGATGAAGATCCGGAGGTTGATGATGTAGCTACCACATCTTTGGTGAATGACGATGTTAATAAAGGAGGTGCTAGATTAGGAGTTGAGAATGAAAACTTATGCCATGATACTGCTGTAAAACCACAAAATGAAGTTGGCAAAGTTCTGTCATCCTTCCCTCTAAGTGGCTCAAAGGACACAAAATATTCAGATATTCCTACGGAGGAATATCGTGTTGTTAATGAGACTGCTATTAGTGATCTTGATCAAGAAAACATGGAGATTGATGAAAGCAAGGAAGGTGAATCATGGATTCAAGGACTTACAGAAGGTGAATATCATGATCTCAGTGTTGAGGAACGCCTGAATGCCCTTGTTGTCTTAACCGGCATTGCAAATGAAGGAAACTCTATTCGCCTTGTTCTTGAGGACCGCTTGGAAGCTGCAAATGCTGTTAAGAAGCAAATGTTGGCAGAGGCTCAGATTGATAAAACTCGCCTAAAAGAAGAGATCATAACTAAAACAGATTTTCCAATTCACATGGGAATCAAGGGTGAAATTGAACTTAATGGTTCTGCTATGGAGGGTGGTCAAAGCCCATTACCGGTTGTTGACAATAGGAACAATGAGGCAACACCAAGCACTACAGAAAACCATAGTAGTGTGCCTAATGAAAGGGCTTCTTTAGTGCCAGACTTTTTCTCTGGCCCAGATAATTTCTTGTCTCAGCAGTATGGACATGCTTCAAAGAGGTCACGCTCACAGTTAAAATCTTATATTGCCCACAAAGCTGAAGAGATGTACACATACAGGTCCTTGCCTCTTGGTCGTGATCGTAGGCGTAATCGTTACTGGCAATTTGTTGCAGCTGCTTCAAGCAATGATCCTGGTTCTGGGAGGATCTTTGTTGAAATGTATGATGGAAAATGGAGGCTTATTGATTCCGAAGAGGGCTTTGATGCTCTTTCAATGTCTTTGGACACACGTGGGATTAGAGAATCACACCTGCGCATGATGTTGCAAATGATAGAGACGACCTTCAAGGAAAATGTTAGGAGAAATTTGCAGTGTGTCAATGTCATGGTTCAAAGTGGAATGACCCTTAAACATGAAACTGGTGAATTGAATTCTAGTCCTGAATGCACTGCTGGATTAAACAGTCCCAGCAGTACCATTTGTGGTTCACATTCGGATACAACGGTAACATCACATTCATTTAGAATTGAGCTTGGGAGAAATGAAAGTGAAAAGAAGGCTGCATTTAAAAGATATCAAGACTTGCAAAAGTGGATATTGAAAGAGTGCTTTAACTCATCGACATTCTGTGCCATGAAATTTGGGAAAAAGAGGTGCACACAGCTATTGGACATTTGTGATTCATGTCTGTGTTTGTTTATTTCTGAACATTCTCACTGCTCTTCATGCCATCAAACTTTTGGCACCAGTGGGAGTGATTTTAATTTTTTTGAACACACACATCAATGTGAAAAGGAACGGAAGTTTAACCGTTGGGATATCCACGCTTTAGATGCATCTCTTCCCCTCAAAAATAGATTGCTCAAAGCCATCCTTGCTTTCATTGAGGCTCATATTGCATCGGAAGCTCTTCAATCATTTTGGACAGAAGAATATCGTAAATGTTGGGGTGTCAAATTGAACATGTCATCATCCATTGTGGAGCTTATACAGATATTGACCCTGTTTGAGAGTGTAATTAAGCGAGATTTTCTGAAATCAGAATTTACTACGACAGAGGAACTTCTCAGCTCGTGTTCTCTTACTGGGAATGTTTTACGTGATCCAGCAGACGTCAGTTCTATCCTTATATTACCTTGGATTCCACGAACAATTCCAGCTGTTGCTCTGAGGCTCTTTGAGCTGGATGCATCCATTTTTTATATTGGGTGCAAGAAACCCGAACCTGACCAGGATAAGGAAATTGGAGAATATACAAACTGTCAGAGTAGGTTTGTTCATGTCAAGAATGATGAGCAGGTCAGACTAAATGATCTTGATTATGACGATTCGATGAAAAGGGAAATTTCAGCTGATCCAAAAAACTTAAGAAAAAGCAACAAACGTGGTCGAGGAAGTCGTGAACAAGGTCATCGTAAGCGGTGGCAGAAAAAAGTTAATGGTTCCAAATCTGATAGTGTCCGGCAAAATCCTAAGAGTAGTGAGAAAATAAAGCAAGGACCGAGACAATTGGGACAAGGAACACAGGTGCTGGGTTTACGGGGCCCCCGTACGGTTAGGAAGAGGAGGGCAGAGACGAGCATTCCAGATGAAACACTGTTTAGTCGAGGGCCTGGCAGTAGTCATCAGACTCGAGATGAGTCTCCAAAAATGTTTATTTCTGAATGGGATGATGAAAAGATGGATAGGTTGGATATGGAAGATGAAGAGAATATTAACAACACAGAACCAATGGACTACTCTGATGATGAAGTTGAGGCAGGGAGGTACGAGCAAGGGAATTGGGAATTTGGTTTTGAGGGCTCATCCAATAGATGGAATGGCGATATAGGGATAGCGAGTGACGAGGATGTAGATTTGTCTGAGGACTATAATGGCACTGAAGAGGTCGGGAATGATGATTTGGAGTTGGATGTGGATACGAGTGAGGAGTCGGATGATTCAGGAAATAGATTAGGAAACAATGAAGGTGGAGAAGAATCTGCTGTCTCAGACGATTATAGTGATTAA | 5220 | 41.99 | MEEVGSAAASDGENHNQINDNINKISNSSEGLSKPKRQMKTPFQLETLEKAYASETYPSESTRAELSEKLGLSDRQLQMWFCHRRLKDKKEPVKKPRKMVAPTLPDSPVDELRVVAEPGSDYGSGSGSGSSPFGDVGRNVMPRTVGDDVPMMRRYYEPSRSVMELRAIACVESQLGEPLREDGPILGIEFDSLPPDAFGAPIAAEQQKRSGHLYGDKYEQRDTKSNKATPRAFPEYPFFPDQSNVRTDVYGSVAQSHYPDPLVEVSAARTPPFLLGHEQLNRGHNYHGQVSRVRLSSQQEKQAVAIPSPAEDNEFVPARDAFANIRMNAQLDHTVVGPENSYVFSDGHIFPNEAIVRLERKRKSEDTRIAKEVEVNEIRIRKELEKQDIMRRKSEERMKKEMEKQDRERKKEEEKLVRERQREAERLKREERRELERKEKFLQKEYLRAEKRMQKEAIRKEKEAVRRKAAMEKATARRIARESMELIDDEQLELMELAAVKKGLSSTISLDLDTLQNLESFRDFLGAFPPKSVQLKKPFSIQPWINSEENIGNLLMVWRFFITFSDVLELWPFTLDEFVQALHDYDSRLLCEIHICLLRLIIKDIEDVARTPSSGLGMNQNGVANAGGGHPQIVEGAYAWGFDIRNWQQLLNPLTWPEIFRQLALSAGFGPQLKKRSVAWPDLHSNDEGKCGEDIVSTLRNGSAAENAFAIMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSDGLTVLELAEKIQRSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYRVRTPYRKDPDDAEEILSVARKKIQIFQNGFLAGEDADDVERDEESECDDVDEDPEVDDVATTSLVNDDVNKGGARLGVENENLCHDTAVKPQNEVGKVLSSFPLSGSKDTKYSDIPTEEYRVVNETAISDLDQENMEIDESKEGESWIQGLTEGEYHDLSVEERLNALVVLTGIANEGNSIRLVLEDRLEAANAVKKQMLAEAQIDKTRLKEEIITKTDFPIHMGIKGEIELNGSAMEGGQSPLPVVDNRNNEATPSTTENHSSVPNERASLVPDFFSGPDNFLSQQYGHASKRSRSQLKSYIAHKAEEMYTYRSLPLGRDRRRNRYWQFVAAASSNDPGSGRIFVEMYDGKWRLIDSEEGFDALSMSLDTRGIRESHLRMMLQMIETTFKENVRRNLQCVNVMVQSGMTLKHETGELNSSPECTAGLNSPSSTICGSHSDTTVTSHSFRIELGRNESEKKAAFKRYQDLQKWILKECFNSSTFCAMKFGKKRCTQLLDICDSCLCLFISEHSHCSSCHQTFGTSGSDFNFFEHTHQCEKERKFNRWDIHALDASLPLKNRLLKAILAFIEAHIASEALQSFWTEEYRKCWGVKLNMSSSIVELIQILTLFESVIKRDFLKSEFTTTEELLSSCSLTGNVLRDPADVSSILILPWIPRTIPAVALRLFELDASIFYIGCKKPEPDQDKEIGEYTNCQSRFVHVKNDEQVRLNDLDYDDSMKREISADPKNLRKSNKRGRGSREQGHRKRWQKKVNGSKSDSVRQNPKSSEKIKQGPRQLGQGTQVLGLRGPRTVRKRRAETSIPDETLFSRGPGSSHQTRDESPKMFISEWDDEKMDRLDMEDEENINNTEPMDYSDDEVEAGRYEQGNWEFGFEGSSNRWNGDIGIASDEDVDLSEDYNGTEEVGNDDLELDVDTSEESDDSGNRLGNNEGGEESAVSDDYSD | 1739 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 36953607 | 36963355 | - | evm.model.ptg000014l.267 | HCH14g0941 | 558844 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH14g0941 | 1739 | SUPERFAMILY | Homeodomain-like | 25 | 91 | IPR009057 | - | |
HCH14g0941 | 1739 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
HCH14g0941 | 1739 | MobiDBLite | consensus disorder prediction | 1552 | 1576 | - | - | |
HCH14g0941 | 1739 | Coils | Coil | 988 | 1008 | - | - | |
HCH14g0941 | 1739 | MobiDBLite | consensus disorder prediction | 10 | 35 | - | - | |
HCH14g0941 | 1739 | MobiDBLite | consensus disorder prediction | 1515 | 1533 | - | - | |
HCH14g0941 | 1739 | MobiDBLite | consensus disorder prediction | 1685 | 1713 | - | - | |
HCH14g0941 | 1739 | SMART | HOX_1 | 33 | 95 | IPR001356 | GO:0003677(InterPro) | |
HCH14g0941 | 1739 | Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 | 937 | 980 | IPR028942 | - | |
HCH14g0941 | 1739 | PANTHER | HOMEOBOX-DDT DOMAIN PROTEIN RLT2 | 14 | 1739 | IPR044977 | GO:0006357(InterPro) | |
HCH14g0941 | 1739 | Pfam | DDT domain | 549 | 604 | IPR018501 | - | |
HCH14g0941 | 1739 | ProSiteProfiles | DDT domain profile. | 548 | 607 | IPR018501 | - | |
HCH14g0941 | 1739 | MobiDBLite | consensus disorder prediction | 117 | 144 | - | - | |
HCH14g0941 | 1739 | Pfam | HB1, ASXL, restriction endonuclease HTH domain | 730 | 797 | IPR007759 | GO:0006355(InterPro) | |
HCH14g0941 | 1739 | MobiDBLite | consensus disorder prediction | 1664 | 1739 | - | - | |
HCH14g0941 | 1739 | Pfam | Williams-Beuren syndrome DDT (WSD), D-TOX E motif | 1108 | 1180 | IPR028941 | - | |
HCH14g0941 | 1739 | Pfam | Homeodomain | 34 | 90 | IPR001356 | GO:0003677(InterPro) | |
HCH14g0941 | 1739 | CDD | homeodomain | 36 | 91 | IPR001356 | GO:0003677(InterPro) | |
HCH14g0941 | 1739 | ProSiteProfiles | 'Homeobox' domain profile. | 31 | 91 | IPR001356 | GO:0003677(InterPro) | |
HCH14g0941 | 1739 | MobiDBLite | consensus disorder prediction | 1534 | 1548 | - | - | |
HCH14g0941 | 1739 | Gene3D | - | 33 | 91 | - | - | |
HCH14g0941 | 1739 | MobiDBLite | consensus disorder prediction | 1603 | 1617 | - | - | |
HCH14g0941 | 1739 | SMART | testlast3 | 548 | 607 | IPR018501 | - | |
HCH14g0941 | 1739 | Coils | Coil | 391 | 468 | - | - | |
HCH14g0941 | 1739 | MobiDBLite | consensus disorder prediction | 391 | 419 | - | - | |
HCH14g0941 | 1739 | ProSiteProfiles | HARE-type HTH domain profile. | 730 | 799 | IPR007759 | GO:0006355(InterPro) | |
HCH14g0941 | 1739 | MobiDBLite | consensus disorder prediction | 1515 | 1618 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH10g0177 | HCH-Chr10:1450790 | HCH14g0941 | HCH-Chr14:36953607 | 3.70E-70 | transposed | |
HCH2g1340 | HCH-Chr2:55364693 | HCH14g0941 | HCH-Chr14:36953607 | 7.00E-16 | transposed | |
HCH14g0941 | HCH-Chr14:36953607 | HCH7g0288 | HCH-Chr7:2035892 | 0.00E+00 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
32989 | PF15613 | WSD | 1.10E-13 | No_clan | HCH | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH14g0941 | - | - | - | 0.0 |