Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0942 ATGGAGTCGCAATTGTTATCACGCGCCACCTCTTTCGCCGGGATTTCCACTCTCCGGAAGCTTCCGAGAGAGAACAGCAGCAGCAGTAGCAATCACGTGTGCTTCGTCACGACAAAACCAATCGCCGAAGGAGGAAACCTCGTATGGGGAAGACAACTCAGACCTTCTCTTCTTCTTGATAACTCAAACCTCGTCTCCGTCAAAAGAGAAACGCTCCTCCGTCCCACCTTCGCCGCGGCTTCTTCACCCGCGGAAGGCAGTGATTCCGCCGGGGAAGCTAAGGTTGCTCCGATCGGCTTCTTCGACAAGTATCCGGCGCTCGTCACCGGTTTCTTTTTCTTCATGTGGTACTTTTTGAACGTGATTTTCAATATCCTTAACAAGAAAATCTATAATTACTTTCCTTATCCTTATTTTGTGTCGGTGGTTCATTTATTAGTTGGAGTTGTTTACTGTTTGATAAGCTGGGCCGTGGGCCTTCCCAAGCGCGCTCCTATTGACTCAAACCTCTTGAAGTTGCTGATCCCAGTCGCTGCATGTCATGCACTTGGTCATGTGACTAGCAATGTCTCCTTTGCAGCTGTTGCTGTCTCCTTCACACATACAATCAAAGCTCTGGAACCTTTCTTTAACGCCTCGGCTTCTCAATTCTTGCTGGGGCAACCTATACCTATTACTTTATGGCTTTCATTGGCCCCTGTTGTCATTGGTGTGTCAATGGCATCATTGACTGAGCTTTCATTCAACTGGACTGGCTTCATCAGTGCTATGATTTCCAATGTCTCCTTTACTTACAGGAGTATTTATTCAAAGAAAGCCATGACTGATATGGATAGCACCAATGTCTATGCCTATATTACCATTATAGCTCTCATATGTTGCCTTCCACCTGCTATAATTTTGGAGGGACCTCAACTTTTGAAGTATGGTTTCAATGATGCAATTGCTAAAGTTGGTCTAACCAAATTTCTCTCTGATCTCTTCTGGGTTGGGATGTTTTATCACCTTTACAATCAGTTAGCAACCAACACCCTGGAGAGGGTGGCCCCGCTTACTCATGCAGTTGGAAATGTGTTGAAACGTGTATTTGTGATTGGCTTCTCCATCCTGGTCTTTGGCAACAAAATTTCAACCCAAACTGGTATTGGAACAAGCATTGCAATTGCAGGAGTGGCAATTTACTCATACTTCAAGGCAAAGATTGAAGAAGAGAAACGACAAGCAAAAGTGGCTTGA 1236 45.15 MESQLLSRATSFAGISTLRKLPRENSSSSSNHVCFVTTKPIAEGGNLVWGRQLRPSLLLDNSNLVSVKRETLLRPTFAAASSPAEGSDSAGEAKVAPIGFFDKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVVHLLVGVVYCLISWAVGLPKRAPIDSNLLKLLIPVAACHALGHVTSNVSFAAVAVSFTHTIKALEPFFNASASQFLLGQPIPITLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNVSFTYRSIYSKKAMTDMDSTNVYAYITIIALICCLPPAIILEGPQLLKYGFNDAIAKVGLTKFLSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILVFGNKISTQTGIGTSIAIAGVAIYSYFKAKIEEEKRQAKVA 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 36966271 36969510 - evm.model.ptg000014l.266 HCH14g0942 558845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0942 411 Pfam Triose-phosphate Transporter family 108 395 IPR004853 -
HCH14g0942 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 287 398 - -
HCH14g0942 411 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 107 405 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
HCH14g0942 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 151 244 - -
HCH14g0942 411 PANTHER SOLUTE CARRIER FAMILY 35 98 398 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0942 HCH-Chr14:36966271 HCH1g0878 HCH-Chr1:57315873 9.60E-149 dispersed
HCH14g0942 HCH-Chr14:36966271 HCH14g0830 HCH-Chr14:36209074 3.70E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0942 K15283 - csv:101220728 699.508