Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0949 ATGGCTGAAGATCAAACAATATCCATGAATAATAGTCTTGAAAGGACCCCTACTTGGGCTGTGGCTGTTGTTTGCTTTATTTTGATTCTGATCTCCATTATTACTGAGTATTTCCTTCATCTTATTGTCACATGGTTTTTCAGCAAGAAGAGAAGGAAATCTCTTACACCAGCTCTTCATAATATCAAATCAGAACTGTTACTCTTAGGTTTCGTATCGCTTTTATTGACGGTAAGCGAGAGCACAGTTGCCAAAATCTGCATCCCAAAGAGTTTAAGCCAAAGTTTTCTTCCATGTGAGACAATGAATTCTGATATCTTTGAGGAAGAAGAAGCTGAATGTGCTTCACAGGGTAAGGTTTCATTCTTGTCAAGAGAAGGTGTAAGGCAACTTCAGTATTTGATATTTGGGCTTGCTTTCTTCCACATAATTTCTAGTGTCCTCACGTTTAGCCTTGGAATGGCTAAGATGAAGAGATGGCAGTCCTGGGAGGCAGAAACCAGAACCTTGGAATATCAATTTACTAATGATCCAAGGAGATTTCAATTTGCACATCAAACATCATTTGGGAAGCGGCATCTGAAATTCTGGAGCGACCACCGCATTCTTCGGTGGCCGGCTTGTTTTCTTAGACAATTTTATGAATCCGTCTCTAGAACCGATTATCTCACTCTAAGACACGGTTTCATCACGGCCCATTTTGCAGAAGGGAGCAAATTTGACTTCCAAAAGTATATAAGAAGAGCTTTGGATAAAGATTTGAGTGTGGTCGTTGGAATCAGTTGGTGGATATGGGTCTTTTCTGTTTTCTTCATATTCTTCAATGCACATGGATTTCGTAACTACCTATGGCTTCCATTTATTCCATTGGTGATGCTTTTAGTGGTCGGAACAAAGCTGCAAGGCATTATAACAGAGATGTGCTTAGACAGCCATGAGAAGTCCCATGTGGTGAGAGGAACGTTTCTTGTTAGGCCCAGTGATAATTACTTCTGGTTTGGGAGGCCCATTTTACTCTTACACTTTATTCACTTCATTTTGTTTCAGAATTCCTTTCAATTAGCTTTCTTTTCATGGACGTGGGTGAAATTCGGTTTAAGATCATGTTTTCACCATCGAATTGAAGATATTGTAATAAGGCTTGTCGTGGGTGTTATAGTACAATTTCTTTGCGCATATGTCACGCTCCCACTCTACGCTTTAGTTGCTCAGATGGGTAGTTTAATGAAGAAAGCTGTGTTCACAGAAGCTGTGGTTGAAGGTTTGATAAAATGGAGAGCCAAAGCAAAGAAAAGCATTGCTCGAAGAAGAAACGCCAATGGAAACTTGCAGTCGCCGCGACTGTCTGTCGACGCCTCTATCGACTCGTCGCCTTCCTTCAGAATTGAAGCTTCGGTACATCAATCTATGGATTCTTGTAATGTAGAGAATAGTGATTCAGTTGCTCAAGGAAAACGACCACTTCAAGATGAAGATCAGCCAAAGAAGGCGGTGAGCTCCTTTGATGGATTTAAGTTGGCAAAAAATATACACATTCAAATGGGCTGA 1548 40.57 MAEDQTISMNNSLERTPTWAVAVVCFILILISIITEYFLHLIVTWFFSKKRRKSLTPALHNIKSELLLLGFVSLLLTVSESTVAKICIPKSLSQSFLPCETMNSDIFEEEEAECASQGKVSFLSREGVRQLQYLIFGLAFFHIISSVLTFSLGMAKMKRWQSWEAETRTLEYQFTNDPRRFQFAHQTSFGKRHLKFWSDHRILRWPACFLRQFYESVSRTDYLTLRHGFITAHFAEGSKFDFQKYIRRALDKDLSVVVGISWWIWVFSVFFIFFNAHGFRNYLWLPFIPLVMLLVVGTKLQGIITEMCLDSHEKSHVVRGTFLVRPSDNYFWFGRPILLLHFIHFILFQNSFQLAFFSWTWVKFGLRSCFHHRIEDIVIRLVVGVIVQFLCAYVTLPLYALVAQMGSLMKKAVFTEAVVEGLIKWRAKAKKSIARRRNANGNLQSPRLSVDASIDSSPSFRIEASVHQSMDSCNVENSDSVAQGKRPLQDEDQPKKAVSSFDGFKLAKNIHIQMG 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 37004386 37008257 - evm.model.ptg000014l.259 HCH14g0949 558852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0949 515 PANTHER MLO-LIKE PROTEIN 1 7 483 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
HCH14g0949 515 Pfam Mlo family 11 106 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
HCH14g0949 515 Pfam Mlo family 108 446 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
HCH14g0949 515 MobiDBLite consensus disorder prediction 476 497 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0949 HCH-Chr14:37004386 HCH3g1261 HCH-Chr3:47585699 9.60E-130 dispersed
HCH14g0949 HCH-Chr14:37004386 HCH2g1166 HCH-Chr2:54237510 5.10E-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0949 K08472 - csv:101222375 666.381