Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH14g0987 | ATGGCTGAGGTCCACAGCAGCAACCATGGAGGTATTAAGCTCTTCGGAACAATGATTACGTTGCAAGGCCGAATAAAGGAGGAGCCCGAAAAAGCCGATGATGATCAAACGGAGATGAAGAGGCCAGAAAAGATCATACCATGTCCAAGATGCAAGAGTATGGAGACTAAATTCTGTTACTTCAACAACTACAATGTTAATCAGCCTAGACATTTCTGCAAAGGCTGCCAAAGGTACTGGACAGCCGGCGGGGCACTCCGAAACGTGCCTATCGGAGCTGGCCGCCGTAGAGCAAAGCCGCCTATTTGTCACAGCCTCACCGGCGAAGATTACCAGTTCTTTGATACTAATTCTAGGGTTATACACCAGCTTGAGTTAGATGGGGTAGGGCGGTGGCACATCACGGTGGCAGAAGAAGGTTTCCGACAAGCTTTTCCCACGAAACGGCAGAAGATCAGCCAACGGGGTCAAACGCCTTAG | 480 | 49.79 | MAEVHSSNHGGIKLFGTMITLQGRIKEEPEKADDDQTEMKRPEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPICHSLTGEDYQFFDTNSRVIHQLELDGVGRWHITVAEEGFRQAFPTKRQKISQRGQTP | 159 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 37225631 | 37226110 | - | evm.model.ptg000014l.221 | HCH14g0987 | 558890 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH14g0987 | 159 | PANTHER | CYCLIC DOF FACTOR 2 | 28 | 105 | IPR045174 | GO:0003677(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0006355(InterPro) | |
HCH14g0987 | 159 | ProSiteProfiles | Zinc finger Dof-type profile. | 46 | 100 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
HCH14g0987 | 159 | Pfam | Dof domain, zinc finger | 44 | 99 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
HCH14g0987 | 159 | ProSitePatterns | Zinc finger Dof-type signature. | 48 | 84 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH14g0987 | HCH-Chr14:37225631 | HCH3g0065 | HCH-Chr3:382593 | 1.40E-31 | dispersed | |
HCH14g0987 | HCH-Chr14:37225631 | HCH3g0702 | HCH-Chr3:4997147 | 8.20E-48 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
32996 | PF02701 | zf-Dof | 1.40E-31 | No_clan | HCH | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH14g0987 | - | - | - | 0.0 |