Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g0994 ATGGCCGACCGGCCGGACCCCAACAAAAAAATCGAAAACACCAACAAGAAAGAAATGCCCGTTCTTCTTCTGGGTCGTTACGAAATCGGCAAACTTCTCGGCCATGGTACTTTTGCTAAAGTTTACCACGCCCGTAACATCAAAACCAACGAAAGTGTCGCTATTAAAGTCATCGACAAGGAAAAGATCCTTAAAGGCGGTCTCATCGCTCATATCAAACGTGAGATCTCTATTCTCCGCCGTGTCCGGCATCCTAATATCGTACAGCTTTTTGAGGTTATGGCCACGAAAGCCAAGATCTATTTTGTTATGGAATTTGTTCGTGGCGGTGAGCTTTTTAAGAAAGTTTCAAAGGGTCGGTTAAAGGAAGAAGTGGCAAGGAAATATTTTCAGCAATTAATCTCTGCTGTTGGATTTTGTCACGCACGTGGTGTTTATCATCGTGATCTTAAACCCGAGAATCTGTTGCTTGATGAAAATGGGAATCTAAAAGTGTCTGATTTTGGTCTTAGTGCTGTTTCTGACCAAATTAGACAAGATGGTTTGTTTCATACTTTTTGTGGTACGCCTGCTTATGTTGCTCCTGAGGTTCTTGCTAGAAAAGGGTATGAAGCTGCTAAGGTTGATATTTGGTCTTGTGGGGTTATTTTGTTTGTTTTAATGGCTGGTTATTTACCTTTTCATGATCAAAATATTATGTCTATGTATAAGAAGATTTATAAGGGTGAGTTTAGGTGTCCGAGATGGTTTTCGCCGGAGTTAATTCGGTTGCTTTCTCGGCTTTTAGATACGAATCCGGAAACCCGGATTACGATTCCTGAGATTATGGAGATCAAATGGTTTAAAAAGGGGTATAAGCATATCAAATTTTATATTGAGGATGATAAAGTTTGTAGCGTTGAGGATTATAATGATGATGATGTTGATTCATTGTCGGATCAATCGATGTCAGAATCGGATTCTGAATTTGAGACTAGGAGGAAGGTTAATACTCCTACTACACTTCCTAGGCCTGCGAGTTTGAATGCATTTGACATTATTTCATTTTCGGCTGGATTTGATCTTTCGGGGTTGTTTGATGATGGGGGAGATGAGACTAGGTTTGTTTCGGGTGCGCCGGTGTCGAAGATTATATCGAAGTTGGAGGAGATTGCGAAAGTTGTGAGCTTTACTGTGAGGAAGAAGGATTGTAGGGTGAGTTTAGAGGGTTCAAGGGAAGGTGTGAAAGGGCCATTGACAATTGCTGCTGAGATATTCGAGTTGACTCCGTCATTGGTGATGGTGGAGGTGAAGAAGAAAGGAGGTGATAAAGCAGAGTACGATCAATTCTGTAATGAGGAATTGAAACCAGTTATGCAGAATTTGATGGTGGAGGATGCTGCTGCTGTTGCTGCTGCTTCATCATATATACCTTCAGATACTGAATAA 1428 41.18 MADRPDPNKKIENTNKKEMPVLLLGRYEIGKLLGHGTFAKVYHARNIKTNESVAIKVIDKEKILKGGLIAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEFVRGGELFKKVSKGRLKEEVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYEAAKVDIWSCGVILFVLMAGYLPFHDQNIMSMYKKIYKGEFRCPRWFSPELIRLLSRLLDTNPETRITIPEIMEIKWFKKGYKHIKFYIEDDKVCSVEDYNDDDVDSLSDQSMSESDSEFETRRKVNTPTTLPRPASLNAFDIISFSAGFDLSGLFDDGGDETRFVSGAPVSKIISKLEEIAKVVSFTVRKKDCRVSLEGSREGVKGPLTIAAEIFELTPSLVMVEVKKKGGDKAEYDQFCNEELKPVMQNLMVEDAAAVAAASSYIPSDTE 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 37275107 37276534 - evm.model.ptg000014l.214 HCH14g0994 558897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g0994 475 MobiDBLite consensus disorder prediction 309 334 - -
HCH14g0994 475 Gene3D Kinase associated domain 1, KA1 338 458 - -
HCH14g0994 475 Pfam NAF domain 338 394 IPR004041 GO:0007165(InterPro)
HCH14g0994 475 FunFam Non-specific serine/threonine protein kinase 18 106 - -
HCH14g0994 475 CDD CIPK_C 342 453 - -
HCH14g0994 475 SMART serkin_6 27 281 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0994 475 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 450 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
HCH14g0994 475 Gene3D Transferase(Phosphotransferase) domain 1 18 336 - -
HCH14g0994 475 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524(InterPro)
HCH14g0994 475 ProSiteProfiles Protein kinase domain profile. 27 281 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0994 475 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g0994 475 SUPERFAMILY Protein kinase-like (PK-like) 23 339 IPR011009 -
HCH14g0994 475 ProSiteProfiles NAF domain profile. 336 360 IPR018451 GO:0007165(InterPro)
HCH14g0994 475 FunFam Non-specific serine/threonine protein kinase 16 329 - -
HCH14g0994 475 CDD STKc_SnRK3 26 280 - -
HCH14g0994 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g0994 475 FunFam Non-specific serine/threonine protein kinase 338 456 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0994 HCH-Chr14:37275107 HCH9g0825 HCH-Chr9:5774557 3.10E-143 dispersed
HCH14g0994 HCH-Chr14:37275107 HCH14g0995 HCH-Chr14:37283103 4.20E-18 tandem
HCH14g0994 HCH-Chr14:37275107 HCH3g0713 HCH-Chr3:5105713 6.90E-151 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81253 PF00069 Pkinase 4.30E-75 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g0994 - - - 0.0