Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH14g0994 | ATGGCCGACCGGCCGGACCCCAACAAAAAAATCGAAAACACCAACAAGAAAGAAATGCCCGTTCTTCTTCTGGGTCGTTACGAAATCGGCAAACTTCTCGGCCATGGTACTTTTGCTAAAGTTTACCACGCCCGTAACATCAAAACCAACGAAAGTGTCGCTATTAAAGTCATCGACAAGGAAAAGATCCTTAAAGGCGGTCTCATCGCTCATATCAAACGTGAGATCTCTATTCTCCGCCGTGTCCGGCATCCTAATATCGTACAGCTTTTTGAGGTTATGGCCACGAAAGCCAAGATCTATTTTGTTATGGAATTTGTTCGTGGCGGTGAGCTTTTTAAGAAAGTTTCAAAGGGTCGGTTAAAGGAAGAAGTGGCAAGGAAATATTTTCAGCAATTAATCTCTGCTGTTGGATTTTGTCACGCACGTGGTGTTTATCATCGTGATCTTAAACCCGAGAATCTGTTGCTTGATGAAAATGGGAATCTAAAAGTGTCTGATTTTGGTCTTAGTGCTGTTTCTGACCAAATTAGACAAGATGGTTTGTTTCATACTTTTTGTGGTACGCCTGCTTATGTTGCTCCTGAGGTTCTTGCTAGAAAAGGGTATGAAGCTGCTAAGGTTGATATTTGGTCTTGTGGGGTTATTTTGTTTGTTTTAATGGCTGGTTATTTACCTTTTCATGATCAAAATATTATGTCTATGTATAAGAAGATTTATAAGGGTGAGTTTAGGTGTCCGAGATGGTTTTCGCCGGAGTTAATTCGGTTGCTTTCTCGGCTTTTAGATACGAATCCGGAAACCCGGATTACGATTCCTGAGATTATGGAGATCAAATGGTTTAAAAAGGGGTATAAGCATATCAAATTTTATATTGAGGATGATAAAGTTTGTAGCGTTGAGGATTATAATGATGATGATGTTGATTCATTGTCGGATCAATCGATGTCAGAATCGGATTCTGAATTTGAGACTAGGAGGAAGGTTAATACTCCTACTACACTTCCTAGGCCTGCGAGTTTGAATGCATTTGACATTATTTCATTTTCGGCTGGATTTGATCTTTCGGGGTTGTTTGATGATGGGGGAGATGAGACTAGGTTTGTTTCGGGTGCGCCGGTGTCGAAGATTATATCGAAGTTGGAGGAGATTGCGAAAGTTGTGAGCTTTACTGTGAGGAAGAAGGATTGTAGGGTGAGTTTAGAGGGTTCAAGGGAAGGTGTGAAAGGGCCATTGACAATTGCTGCTGAGATATTCGAGTTGACTCCGTCATTGGTGATGGTGGAGGTGAAGAAGAAAGGAGGTGATAAAGCAGAGTACGATCAATTCTGTAATGAGGAATTGAAACCAGTTATGCAGAATTTGATGGTGGAGGATGCTGCTGCTGTTGCTGCTGCTTCATCATATATACCTTCAGATACTGAATAA | 1428 | 41.18 | MADRPDPNKKIENTNKKEMPVLLLGRYEIGKLLGHGTFAKVYHARNIKTNESVAIKVIDKEKILKGGLIAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEFVRGGELFKKVSKGRLKEEVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYEAAKVDIWSCGVILFVLMAGYLPFHDQNIMSMYKKIYKGEFRCPRWFSPELIRLLSRLLDTNPETRITIPEIMEIKWFKKGYKHIKFYIEDDKVCSVEDYNDDDVDSLSDQSMSESDSEFETRRKVNTPTTLPRPASLNAFDIISFSAGFDLSGLFDDGGDETRFVSGAPVSKIISKLEEIAKVVSFTVRKKDCRVSLEGSREGVKGPLTIAAEIFELTPSLVMVEVKKKGGDKAEYDQFCNEELKPVMQNLMVEDAAAVAAASSYIPSDTE | 475 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 37275107 | 37276534 | - | evm.model.ptg000014l.214 | HCH14g0994 | 558897 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH14g0994 | 475 | MobiDBLite | consensus disorder prediction | 309 | 334 | - | - | |
HCH14g0994 | 475 | Gene3D | Kinase associated domain 1, KA1 | 338 | 458 | - | - | |
HCH14g0994 | 475 | Pfam | NAF domain | 338 | 394 | IPR004041 | GO:0007165(InterPro) | |
HCH14g0994 | 475 | FunFam | Non-specific serine/threonine protein kinase | 18 | 106 | - | - | |
HCH14g0994 | 475 | CDD | CIPK_C | 342 | 453 | - | - | |
HCH14g0994 | 475 | SMART | serkin_6 | 27 | 281 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g0994 | 475 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 12 | 450 | - | GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
HCH14g0994 | 475 | Gene3D | Transferase(Phosphotransferase) domain 1 | 18 | 336 | - | - | |
HCH14g0994 | 475 | ProSitePatterns | Protein kinases ATP-binding region signature. | 33 | 56 | IPR017441 | GO:0005524(InterPro) | |
HCH14g0994 | 475 | ProSiteProfiles | Protein kinase domain profile. | 27 | 281 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g0994 | 475 | Pfam | Protein kinase domain | 27 | 281 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g0994 | 475 | SUPERFAMILY | Protein kinase-like (PK-like) | 23 | 339 | IPR011009 | - | |
HCH14g0994 | 475 | ProSiteProfiles | NAF domain profile. | 336 | 360 | IPR018451 | GO:0007165(InterPro) | |
HCH14g0994 | 475 | FunFam | Non-specific serine/threonine protein kinase | 16 | 329 | - | - | |
HCH14g0994 | 475 | CDD | STKc_SnRK3 | 26 | 280 | - | - | |
HCH14g0994 | 475 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 145 | 157 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH14g0994 | 475 | FunFam | Non-specific serine/threonine protein kinase | 338 | 456 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH14g0994 | HCH-Chr14:37275107 | HCH9g0825 | HCH-Chr9:5774557 | 3.10E-143 | dispersed | |
HCH14g0994 | HCH-Chr14:37275107 | HCH14g0995 | HCH-Chr14:37283103 | 4.20E-18 | tandem | |
HCH14g0994 | HCH-Chr14:37275107 | HCH3g0713 | HCH-Chr3:5105713 | 6.90E-151 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81253 | PF00069 | Pkinase | 4.30E-75 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH14g0994 | - | - | - | 0.0 |