Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH14g1044 | ATGTCTGATGATTTCAAAGACTTTTGTTTCTCAAACCCTTTTAGAGAAGATAAACAAAAACTATATTCCATTTCTACTGGTTCATCAGTTTATAATAATAATCTCCAAGGGGTTGACTTTGAATCAGAAGCTATGGATTATGACTCTCTAGCCAAAGCCTTTGGGTTATCACCCTCTTCTGATGAAGTCTTTTCATCCATTGATCAAGCTAATCATGTTATTGCTAATAATGAAATTTCAGGAACCCCAAATTCTTCTGCTTCTTTCTCCTCTACTGAGGCTGGTGCTGAAGAAGATTCTGATAAACATGAGCCTAGAGAGATGGAAGATGGAGGAGAGAGCTCGAAGGACGTGAAGAGATCAAAAAAGAAAGAAGAGAAAAAGGAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGAAGTTGATCATCTAGAAGATGGATATAGATGGAGAAAATATGGACAAAAAGCTGTCAAAAATAGCGCTTATCCAAGAAGCTACTACAGATGCACGACTCAGAAATGCGGGGTGAAGAAACGGGTGGAGAGGTCGTATGAAGATCCGGCCATCGTGATAACGACGTACGAAGGCCAGCACAACCACCCACTTCCGGCAACTCTAAGAGGAAATCTCTCGGCAGCCGCCACGTTTCCGCCGTCCATGCTCACGCCAATGCCGGTGGTCAATCATGGCGGTTATCTTCCAGAATTGTTTAGTAATACTAATACACCGACGAATAATAATTACCAAGTCGGTGGCAGCGGCGGCGGTTCTTCAGGCGGCTCGGTTTATTCACAAAGCGGTCTCATTAGCTACCCTTACCAACAGCCGGATTATGGACTTTTGCAAGACATTTTTTCAGCTTCCTCGTTTTTGAACCGGCAGCCGTAG | 894 | 43.18 | MSDDFKDFCFSNPFREDKQKLYSISTGSSVYNNNLQGVDFESEAMDYDSLAKAFGLSPSSDEVFSSIDQANHVIANNEISGTPNSSASFSSTEAGAEEDSDKHEPREMEDGGESSKDVKRSKKKEEKKEREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSAYPRSYYRCTTQKCGVKKRVERSYEDPAIVITTYEGQHNHPLPATLRGNLSAAATFPPSMLTPMPVVNHGGYLPELFSNTNTPTNNNYQVGGSGGGSSGGSVYSQSGLISYPYQQPDYGLLQDIFSASSFLNRQP | 297 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 37573823 | 37575783 | + | evm.model.ptg000014l.164 | HCH14g1044 | 558947 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH14g1044 | 297 | MobiDBLite | consensus disorder prediction | 95 | 132 | - | - | |
HCH14g1044 | 297 | ProSiteProfiles | WRKY domain profile. | 140 | 205 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
HCH14g1044 | 297 | SMART | WRKY_cls | 145 | 204 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
HCH14g1044 | 297 | SUPERFAMILY | WRKY DNA-binding domain | 137 | 205 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
HCH14g1044 | 297 | FunFam | WRKY transcription factor 57 | 131 | 205 | - | - | |
HCH14g1044 | 297 | Gene3D | WRKY domain | 130 | 206 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
HCH14g1044 | 297 | MobiDBLite | consensus disorder prediction | 77 | 94 | - | - | |
HCH14g1044 | 297 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 71 | 213 | IPR044810 | GO:0003700(InterPro) | |
HCH14g1044 | 297 | Pfam | WRKY DNA -binding domain | 146 | 203 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
HCH14g1044 | 297 | MobiDBLite | consensus disorder prediction | 77 | 132 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH14g1044 | HCH-Chr14:37573823 | HCH7g0047 | HCH-Chr7:332760 | 5.70E-42 | dispersed | |
HCH14g1044 | HCH-Chr14:37573823 | HCH2g0990 | HCH-Chr2:53176155 | 2.30E-19 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
33003 | PF03106 | WRKY | 2.20E-25 | CL0274 | HCH | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH14g1044 | - | - | - | 0.0 |