Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g1060 ATGGATTCCTTCGTTGGAATACTATCCCCATTACTTCCATTCCTCGTTTCTTTCGTTTTTCTCATTCTCTTCTTGGAACAGATCTCTTACTTGAAAAAGAAACGGTCAGTTCCCGGCCCTTCTTTAGTCTTCCCGATCGTCGGTAACGCTATCCCATTGGTCAGAAACCCTGCCCGTTTCTGGGAAATCCAATCATCTCTCGCTAAATCCTCCGGCTTTGGTTACTCCGTTAACTACATCGCCGGAAAATTCATCGTCTTTATTCGCGACACTGAGCTTTCTCACAAGATTTTCGCCAATGTACGTTCCGATGCCCTAAATCTCGTCGGCCATCCGTTCGGGAAAAAATTATTCGGCGAAGATAATTTGATTTACATGTTAGGTCAAAAACACAAAGATCTCCGCCGTCGAATCGCTCCTAATTTCACGCCTAAAGCCCTAGCTACCTACACCGCGTTGCAGCAGATTACAATCCTTAAACACTTGAAAAAATGGGAGGAGATATCGTCGGAAAGTTCTCCGAAACCGATACCGTTGCGGTTTTTAGCTCGAGATCTAAATCTCGAAACTTCTCAATCGGTTTTCGTAGGGCCGTATTTAGGCGAAGAAGTGAGAGAGAAATTTAGATTTGATTATAATCTTTTCAATATAGGGCTTATGAAACTGCCTATTGATTTACCGGGAACCGGATTTAGAAACGCGAGACTCGCCGTTGACCGATTAGTTGAGATTCTTTCTGATTGTGCAGCGAAGAGTAAATCGAAGATGATGAGAGAAGAAGAACCGTCGTGTTTGGTTGATTTTTGGATGCATGATACGGTTCAGGAATTAGCCGCAGCCGCCGCCGCTGGTGAACCGGAACCGGTTCACACTAGTAATTTCGAGCTTGGTTTATATCTTTTCGATTTCCTCTTCGCCGCTCAAGATGCATCAACTTCGTCTCTCCTTTGGGCCGTCTCGCTTCTTGATTTAAATCCTGAAGTCGTGACGAAAGTTCGCGAAGAAGTAAAAACAATTTGGTCGCCGGAATCGGATTCTTTGATCACGTCGGCGAATCTGGCGGACATGAAATACACACAGGCAGTGGCTCGTGAGGTCGTTCGTTACCGTGCTCCGGCGACCGTTGTCCCTCATGTCGCCGCCCAGGATTTTCCGTTGACTGAATCGTACAAGATTCCGAAAGGTGCGATTGTTTTTCCGTCAGCTTATGAATCGTGTTTTCAGGGTTTTAGTGAACCGGAGCGGTTTGACCCGGATCGGTTTTCGGAAGAGCGACAAGAGGACCGGATTTTCAAAAAAAACTTTTTGGCTTTCGGGGCTGGGTCCCATCAATGCGTGGGGCAACGGTATGCAATCAATCAACTCGTGCTCTTTATTGCTATGTTTTGTACTTTGCTTGATTTCAAGAGGCATAGATCGGACGGCTGTGATGAAATCGCTTTTAATCCTACGATTTGTCCCAAGGACGATTGCATGGTTTCAATTTCCAAGCGTTGCGTTCGATATCCTGAATTTTCTAGCTGA 1524 45.54 MDSFVGILSPLLPFLVSFVFLILFLEQISYLKKKRSVPGPSLVFPIVGNAIPLVRNPARFWEIQSSLAKSSGFGYSVNYIAGKFIVFIRDTELSHKIFANVRSDALNLVGHPFGKKLFGEDNLIYMLGQKHKDLRRRIAPNFTPKALATYTALQQITILKHLKKWEEISSESSPKPIPLRFLARDLNLETSQSVFVGPYLGEEVREKFRFDYNLFNIGLMKLPIDLPGTGFRNARLAVDRLVEILSDCAAKSKSKMMREEEPSCLVDFWMHDTVQELAAAAAAGEPEPVHTSNFELGLYLFDFLFAAQDASTSSLLWAVSLLDLNPEVVTKVREEVKTIWSPESDSLITSANLADMKYTQAVAREVVRYRAPATVVPHVAAQDFPLTESYKIPKGAIVFPSAYESCFQGFSEPERFDPDRFSEERQEDRIFKKNFLAFGAGSHQCVGQRYAINQLVLFIAMFCTLLDFKRHRSDGCDEIAFNPTICPKDDCMVSISKRCVRYPEFSS 507
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 37651953 37653476 - evm.model.ptg000014l.148 HCH14g1060 558963
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH14g1060 507 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g1060 507 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g1060 507 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g1060 507 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g1060 507 CDD CYP61_CYP710 74 491 - -
HCH14g1060 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH14g1060 507 PANTHER CYTOCHROME P450 26 38 464 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
HCH14g1060 507 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g1060 507 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g1060 507 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g1060 507 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g1060 507 Gene3D Cytochrome P450 28 502 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g1060 507 Pfam Cytochrome P450 38 468 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g1060 507 SUPERFAMILY Cytochrome P450 30 498 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH14g1060 507 FunFam Cytochrome P450 61 27 498 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g1060 HCH-Chr14:37651953 HCH4g0644 HCH-Chr4:4222083 1.50E-18 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g1060 K09832 - csv:101221194 862.833