Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH14g1094 | ATGTCTTCGACTTCGAGGTCAGCCAATGGTGGCAAGACACGTGTGGGGAAGTATGAGCTTGGTAGGACAATTGGGGAAGGGAACTTTGCTAAGGTTAAATTTGCTCGGAATTCGGAGACCGGCGAGAACGTGGCTATTAAAATTCTTGATAAAGAAAAACTTCTCAAGCATAAGATGATCGGGCAGATCAAACGTGAAATAGGAACAATGAAACTGATTAGACATCCAAATGTCATCCGCATGTATGAGGTGATGGCCAGCAAGACCAAGATATATATTGTTTTAGAATTTGTAACCGGAGGAGAACTGTTTGACAAAATTGCAAGTAAGGGGAGATTGAAAGAGGATGAGGCGAGAAAGTATTTTCAGCAGCTCATTAATGCAGTGGATTATTGTCATAGCAGAGGTGTTTTTCACAGAGATCTAAAGCTAGAGAATTTATTACTGGATGCTAGTGGCGTTCTTAAAGTATCCGATTTTGGATTGAGTGCTCTACCTCAGCAAGTTCGAGAAGATGGATTGCTTCATACAACATGTGGAACGCCTAATTATGTTGCTCCAGAGGTTATCAACAACAAAGGCTATGTTGGAGCTAAGGCAGACCTATGGTCGTGTGGGGTTATTCTTTTTGTCCTCATGGCAGGCTATTTGCCATTTGAAGAATCTAACCTTACGGCACTATATAAAAAGATTTTTAAGGCTGACTTCACCTGTCCTTCGTGGTTCTCAACTAATGCAAAGAAATTAATCAAGAGAATCTTGGATCCAAATCCATCAACTCGAATTACAATTGCTGAGGTCCTTGAGAATGAGTGGTTTAAGAAAGGATACAAGGCACCCACTTTTGAAAGTGCTGATGTCGATCATCTTGATGATATTGACTCCATCTTCAATGAATTAGGGGATTCTTGTAGCCTTGTTGTTGAGAGGAGAGAAGAACGCCCTGGGTCACCTGTCACCATGAATGCGTTTGAACTCATCTCAAAATCTCAGGGTCTCAACCTGGCTTCTCTTTTTGAAAAGCAAATGGGGTTAATCAAACGTGAAACGAGATTCACATCAAATTGTCCTGCAGATGAGATTATTGCTAAGATCGAGAAGGCTGCAGTTCCTCTGGGCTTTGATGTGAAGAAAAATAACTTCAAGATGAAGCTTCAAGGGGAAAAGACTGGACGTAAAGGTCATTTATCAGTTGCAACAGAGATTTTACAGGTTGCTCCTTCACTCTACATTGTCGAGCTGCGGAAAGCGGGAGGAGATACTTTAGAATTTCACGATTTCTACAGTAACCTCTCAACTGGACTGAAGGATATTGTATGGAGGCATGGAGACGGGTTGGGGAAGGAAACTAATGGCCCTGGTGGTGTAATTTCTAGGCCATTGGCTATCTGA | 1392 | 41.88 | MSSTSRSANGGKTRVGKYELGRTIGEGNFAKVKFARNSETGENVAIKILDKEKLLKHKMIGQIKREIGTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASKGRLKEDEARKYFQQLINAVDYCHSRGVFHRDLKLENLLLDASGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVINNKGYVGAKADLWSCGVILFVLMAGYLPFEESNLTALYKKIFKADFTCPSWFSTNAKKLIKRILDPNPSTRITIAEVLENEWFKKGYKAPTFESADVDHLDDIDSIFNELGDSCSLVVERREERPGSPVTMNAFELISKSQGLNLASLFEKQMGLIKRETRFTSNCPADEIIAKIEKAAVPLGFDVKKNNFKMKLQGEKTGRKGHLSVATEILQVAPSLYIVELRKAGGDTLEFHDFYSNLSTGLKDIVWRHGDGLGKETNGPGGVISRPLAI | 463 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 37877312 | 37881832 | + | evm.model.ptg000014l.114 | HCH14g1094 | 558997 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH14g1094 | 463 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 137 | 149 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH14g1094 | 463 | FunFam | Non-specific serine/threonine protein kinase | 11 | 315 | - | - | |
HCH14g1094 | 463 | Gene3D | Transferase(Phosphotransferase) domain 1 | 11 | 319 | - | - | |
HCH14g1094 | 463 | Gene3D | Kinase associated domain 1, KA1 | 320 | 441 | - | - | |
HCH14g1094 | 463 | CDD | CIPK_C | 322 | 437 | - | - | |
HCH14g1094 | 463 | CDD | STKc_SnRK3 | 17 | 272 | - | - | |
HCH14g1094 | 463 | SUPERFAMILY | Protein kinase-like (PK-like) | 15 | 281 | IPR011009 | - | |
HCH14g1094 | 463 | SMART | serkin_6 | 18 | 273 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g1094 | 463 | Pfam | Protein kinase domain | 18 | 273 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g1094 | 463 | ProSiteProfiles | Protein kinase domain profile. | 18 | 273 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g1094 | 463 | FunFam | Non-specific serine/threonine protein kinase | 9 | 97 | - | - | |
HCH14g1094 | 463 | ProSiteProfiles | NAF domain profile. | 316 | 340 | IPR018451 | GO:0007165(InterPro) | |
HCH14g1094 | 463 | FunFam | Non-specific serine/threonine protein kinase | 315 | 441 | - | - | |
HCH14g1094 | 463 | Pfam | NAF domain | 318 | 378 | IPR004041 | GO:0007165(InterPro) | |
HCH14g1094 | 463 | ProSitePatterns | Protein kinases ATP-binding region signature. | 24 | 47 | IPR017441 | GO:0005524(InterPro) | |
HCH14g1094 | 463 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 9 | 425 | - | GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH14g1094 | HCH-Chr14:37877312 | HCH2g1466 | HCH-Chr2:56197623 | 2.30E-175 | dispersed | |
HCH14g1094 | HCH-Chr14:37877312 | HCH3g0829 | HCH-Chr3:6240969 | 4.70E-221 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81258 | PF00069 | Pkinase | 9.80E-75 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH14g1094 | - | - | - | 0.0 |