Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g1131 ATGGGGAATTGGTTCTTGATTCTGCTACTAGTGCTGATAATCTGTGTGCATTTAGCTCAAAGCAATTCCCTTTTAATTAATTGTGGAACAAGTTCTAATGTAACTATTGATGGTCGAAGATGGATTGGTGATTTGACTTCTGAGAGCAATTTTTCTCTTGGCAATCTTGGTATGAATATCAATGCCTCCACAACCACTTTAGGTGAAGTTTCTGGCTTTGGGCTACTGTATCAAACTGCTCGTTTATTCACCGAGACTCTAAATTATACATTTAGAGGTGTTCAGGGAACTAATTTTGTGAGGCTGCATTTCTGCCCCTTTCTGTTTGAAGACTTCAATGTAAACGAGTCGTCGTTTTCTGTCTCGGCGAACGGTCTTAGACTGGTTTCAGAATTCAGTGTTCCGACTGAGATTGCACATAAAAATATGGAGTTTCAGCAGTCTGGGGTCAATTCGAGTGTATTGTATTTGATTAAAGAGTTTATTGTTGCTGTCGACTTGGATGTGTTTGTTATTGAGTTCTCGCCTTCTAGAGGGTCATTTGGATTCATAAATGCTATTGAAATTGTCCCTTTGGTGGATGAGATTTTTGCAGGTTCTGTTGATAAGGTGGGTGGAAATTCTGTTCATTTGAATGTGGGTGAAAGAGGAACTGAAACTATGTACAGATTGAATGTTGGTGGTCCAGAGATCAAACACAATCAAGATTCAGATCTTTGGAGAATGTGGGAAGTGGACTCAAGTTATATGATCACGGCAAATGCTGGGTCTGAGATAAAAAACAGTTCTAATATAACATATGCTTCCGTGAACGACTCTGTTATAGCTCCTCTCCTTGTGTATGAAACAGCCAGAGCAATGTCTGAGAATGAGGTACTCGAAAAAAGGTTCAACATGTCATGGAAATTTGAAGTTGATCCTGATTTTGAATATCTGATTAGATTGCACTTCTGTGAACTGCTATATGATCAGGCAAGAGAAAGAGTTTTCCGTATATACATAAATAACAGGACTGCAGTAGAAAATTTTGATGTGTTTGTTCGAGCAGGGGGGATGAATAGAGCATATCATGTGGATTTTCTTGTGCCAATAACTTCTAAAATCAACACACTTTGGATTCAGTTGGGTCCTGATACAAGTGCAGGTGCTGCTGGAACGGATGCTCTCTTGAATGGGCTGGAAATTTTTAAGCTTAGTCAAAACGGGAACCTTGCGTACGTTGACAGGTTTAATTCCCTAGAGGATTCAGGGGGGGACTCAAAATCTCGAGTTCTTTGGGTGAGCATTGGAGCGGGTTTAGCATCTGTTGTTTTCCTTGGTCTTATTACCTCTCTCATCTTCTATTTTTGCAAAATCCGGCCAAAGAATTCAAGTGATTCTAAAAAGAACTCTTTAAGGTGGAGAACAGCATCTACTCATGGGACCAATGTTACCAACACTTACAATGCCAGAGGGTCAATGGGAGGTCAAAGTCTATATGCGTCCATGCCATCTACCAGAGTTGGTAAGTGGTTTACATTAGCAGAAATTCTTGCAGCAACAGATAATTTTGATGAAAGTTTGCTGATTGGAGTTGGAGGTTTTGGTAAAGTTTACAAAGGGGAGATTGATGATGATGGCACTCTTGCAGCAATCAAGAGGGCCAACCCACAGTCTCAGCAAGGACTTGCCGAGTTCGAGACTGAAATTGAGATGCTATCTAAACTTAGGCACAGGCATCTGGTTTCCATGATTGGTTTTTGTGATGAGCAGAGGGAAATGATCTTGGTTTACGAGTATATGGCTAATGGCACCCTTAGAAGCCATCTCTTTGGGAGTGATCTCCCTCCTTTGACTTGGAAGCAGCGATTAGAAGTTTGCATTGGTGCTGCCAGGGGACTCCATTACCTTCATACAGGAGCGGACCGAGGAATAATCCACAGGGACGTAAAGACCACCAACATACTCCTAGATGAGAACTTTGTTGCAAAAATGTCTGATTTTGGTCTTTCAAAAACAGGACCTGCTTTGGATCATACTCATGTAAGTACTGCAGTTAAAGGCAGCTTTGGTTATCTAGACCCGGAGTATTTCAGGCGCCAGCAGTTGACTGAAAAATCTGATGTCTATTCTTTTGGTGTGGTGTTGTTGGAAGTTGTTTGTGCACGCGCTGTTATAAATCCAACCTTACCAAAGGATCAGATAAATCTTGCAGAATGGGCAATGAGATGGCAACGCAAAAGGTTGCTTCAAACCATCATTGATTCACATCTCAAAGGAAAATACTGCCCTGAGTCTCTGAAAACATTTGGGGAGATAGCAGAAAAATGTCTTGCTGATGAGGGGAAGAGCCGTCCAACAATGGGAGAAGTTCTATGGCACCTGGAGTATGCTTTACAACTTCACGATGCATGGATTCGCACCAACGATGCAGAAAGTTCTTGTACAGTTAACTCAGAAGGAGCACAAGTTGAACAAAGGCGTGAGCTCGGTGGGGAAGATGAAGGCACCAACTTAGAACTCAGAATGAAGAGTAAAGAAGAATCTCCTAATACCTAA 2538 41.53 MGNWFLILLLVLIICVHLAQSNSLLINCGTSSNVTIDGRRWIGDLTSESNFSLGNLGMNINASTTTLGEVSGFGLLYQTARLFTETLNYTFRGVQGTNFVRLHFCPFLFEDFNVNESSFSVSANGLRLVSEFSVPTEIAHKNMEFQQSGVNSSVLYLIKEFIVAVDLDVFVIEFSPSRGSFGFINAIEIVPLVDEIFAGSVDKVGGNSVHLNVGERGTETMYRLNVGGPEIKHNQDSDLWRMWEVDSSYMITANAGSEIKNSSNITYASVNDSVIAPLLVYETARAMSENEVLEKRFNMSWKFEVDPDFEYLIRLHFCELLYDQARERVFRIYINNRTAVENFDVFVRAGGMNRAYHVDFLVPITSKINTLWIQLGPDTSAGAAGTDALLNGLEIFKLSQNGNLAYVDRFNSLEDSGGDSKSRVLWVSIGAGLASVVFLGLITSLIFYFCKIRPKNSSDSKKNSLRWRTASTHGTNVTNTYNARGSMGGQSLYASMPSTRVGKWFTLAEILAATDNFDESLLIGVGGFGKVYKGEIDDDGTLAAIKRANPQSQQGLAEFETEIEMLSKLRHRHLVSMIGFCDEQREMILVYEYMANGTLRSHLFGSDLPPLTWKQRLEVCIGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPALDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEVVCARAVINPTLPKDQINLAEWAMRWQRKRLLQTIIDSHLKGKYCPESLKTFGEIAEKCLADEGKSRPTMGEVLWHLEYALQLHDAWIRTNDAESSCTVNSEGAQVEQRRELGGEDEGTNLELRMKSKEESPNT 845
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 38199611 38202148 + evm.model.ptg000014l.77 HCH14g1131 559034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH14g1131 845 SMART serkin_6 517 791 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g1131 845 FunFam Receptor-like protein kinase FERONIA 594 808 - -
HCH14g1131 845 CDD STKc_IRAK 523 789 - -
HCH14g1131 845 Pfam Malectin-like domain 26 397 IPR024788 -
HCH14g1131 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g1131 845 FunFam Receptor-like protein kinase FERONIA 217 400 - -
HCH14g1131 845 MobiDBLite consensus disorder prediction 809 845 - -
HCH14g1131 845 ProSiteProfiles Protein kinase domain profile. 517 790 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g1131 845 Pfam Protein tyrosine and serine/threonine kinase 523 786 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g1131 845 PANTHER OS07G0166700 PROTEIN 505 795 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
HCH14g1131 845 MobiDBLite consensus disorder prediction 819 845 - -
HCH14g1131 845 Gene3D - 19 192 - -
HCH14g1131 845 Gene3D - 216 400 - -
HCH14g1131 845 FunFam FERONIA receptor-like kinase 23 193 - -
HCH14g1131 845 Gene3D Phosphorylase Kinase; domain 1 484 593 - -
HCH14g1131 845 FunFam receptor-like protein kinase FERONIA 481 593 - -
HCH14g1131 845 ProSitePatterns Protein kinases ATP-binding region signature. 523 546 IPR017441 GO:0005524(InterPro)
HCH14g1131 845 SUPERFAMILY Protein kinase-like (PK-like) 492 790 IPR011009 -
HCH14g1131 845 Gene3D Transferase(Phosphotransferase) domain 1 594 814 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g0683 HCH-Chr14:35332141 HCH14g1131 HCH-Chr14:38199611 1.00E-61 dispersed
HCH14g1131 HCH-Chr14:38199611 HCH8g1279 HCH-Chr8:47967930 2.00E-172 dispersed
HCH14g1131 HCH-Chr14:38199611 HCH2g1125 HCH-Chr2:53975542 1.40E-173 transposed
HCH14g1131 HCH-Chr14:38199611 HCH9g0843 HCH-Chr9:5967702 1.40E-173 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81259 PF12819 Malectin_like 2.40E-29 CL0202 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g1131 - - - 0.0