Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH14g1144 | ATGACCGGAGTTTTCGAAGTCGTCGCCGTTCCTTACAATCCCGACGGCTGGGGCCCACCGGATTCAACAACAGCCACCGCCGCCTCATCAAATCTCCCTCTCAACGTTCCCTTCGCTCCTTTCTCTCGCTCCGATAAGCTCGGCCGCATCGCCGATTGGACTCGAACAATCAACAATCCCGGACGCACTAAAAACGCTTCAGATGCCGTCTTCGATTTCTCAAACGACGATTCTTTCCCTGCCTCCGCCGATGACGACATGTCGTTCCGATTAGTCGACGGAAAGCCCCCTCCACGCCCTAAATTTGGCCCCAAATGGCGATTTAATCAACAAAGAACTCAGCTTCCTCAACGCCGTGACGAAGAAGTGGAAGCTAAAAAACGTGAGGCTGAAAAAGAACGCGCTCGCCGTGACCGTCAATATAATATCAATAGGTCTAACGTTCACGGTCCACGTCGAGAAGCTGCTGTTTTTAAATCGTCTGTTGAAATTCAACCTGAATGGAATATGCTTGATCAGATTCCGTTTTCGACGTTTTCGAAACTCTCCTTCTCTGTTCCGGAGCCGGAGGATCTTCTTCTCTGCGGCGGACTTGAGTTTTATGATCGGACTTTCGACCGCACCACTCCGAAGAACGAGCGTCGTCTTGAGCGGTTTAAGAATCGGAATTTCTTTAAGGTAACTACTACTGATGATCCTGTTATTCGCCGTCTTGCGAATGAGGATAAAGCTACGGTTTTTGCTACCGATGCTATACTTTCGACGCTTATGTGTGCTACTAGGTCGGTTTATTCGTGGGACATTGTTGTTCAGCGTGTTGGGAATAAGCTTTTCTTTGATAAGAGGGATGGTTCGCAGCTTGATTTACTGTCGGTCCACGAGACCTCGCAGGAGCCTTTGCCCGAGGCGAAGGACGATATCAATTCGGCTTATTCGTTGAGTGTCGAGGCTGCGTATATTAATCAGAATTTCTCGCAGCAGGTTTTGGTTAGGGATGGAAATAAGGTGGCTTTTGATGAGCCGAATCCATTTGCGAATGAGGGTGAGGAGGTTGCTTCTGTGGCTTATAGGTATAGGAGGTGGAAGCTTGATAATGAAATGTACCTTGTGGCGAGATGTGAGGTTCAGAGTGTTATGGAGGTTAATAAGCAGAGATCGTTTTTGACTTTGAATGCTCTTAATGAATTTGACCCCAAGTATTCCGGTGTTGATTGGAGGCAGAAATTGGAGACACAAAGGGGTGCTGTTTTGGCTACCGAGTTGAAGAACAATGCTAATAAATTGGCCAAATGGACAGCGCAAGCACTGTTGGCTAGCGCGGATATGATGAAGTTGGGATATGTCTCTAGGGTTCATCCACGCGATCATTTTAACCATGTTATCTTAGCTGTTGTTGGGTATAAACCTAAGGATTTTGCAGGTCAAATTAACTTGAATACGTCTAATATGTGGGGTATTGTCAAATCCATTGTGGATTTGTGCATGAAATTGAATGAAGGTAAGTATGTTTTGGTTAAGGACCCAGCAAAACCACAGGTGAGGATCTATGAGGTTCCTGCAGATGCATTTGAGAATGATTATGTAGAGGAGCCACTGCCTGAAGAGGACCAAGTGCAACCACCAGTTGAAGATGAAAGTGTTGAAACTGCTGTTGTGGGGACGGCTGAAGCAGAAGAGAAGGTTGATGCTCAGGCTTAA | 1698 | 46.64 | MTGVFEVVAVPYNPDGWGPPDSTTATAASSNLPLNVPFAPFSRSDKLGRIADWTRTINNPGRTKNASDAVFDFSNDDSFPASADDDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDEEVEAKKREAEKERARRDRQYNINRSNVHGPRREAAVFKSSVEIQPEWNMLDQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRTFDRTTPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSTLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVAFDEPNPFANEGEEVASVAYRYRRWKLDNEMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFAGQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPAKPQVRIYEVPADAFENDYVEEPLPEEDQVQPPVEDESVETAVVGTAEAEEKVDAQA | 565 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 38295696 | 38297393 | + | evm.model.ptg000014l.64 | HCH14g1144 | 559047 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH14g1144 | 565 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 | 4 | 540 | IPR007783 | GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005737(InterPro)|GO:0005852(PANTHER)|GO:0005852(InterPro)|GO:0006413(PANTHER) | |
| HCH14g1144 | 565 | Coils | Coil | 118 | 138 | - | - | |
| HCH14g1144 | 565 | PIRSF | Transl_init_eIF3d | 1 | 547 | IPR007783 | GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro) | |
| HCH14g1144 | 565 | MobiDBLite | consensus disorder prediction | 95 | 136 | - | - | |
| HCH14g1144 | 565 | Hamap | Eukaryotic translation initiation factor 3 subunit D [EIF3D]. | 3 | 529 | IPR007783 | GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro) | |
| HCH14g1144 | 565 | Pfam | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) | 5 | 517 | IPR007783 | GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro) | |
| HCH14g1144 | 565 | MobiDBLite | consensus disorder prediction | 114 | 136 | - | - | |
| HCH14g1144 | 565 | MobiDBLite | consensus disorder prediction | 530 | 565 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH14g1144 | K03251 | - | csv:101208923 | 1035.02 |