Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH14g1147 ATGGATTCGGCGAGGAGTTGGTTACAGAAGTTTCATCCTAGAGTAAAGAAGGAAACTGAAACCGAAAAAGAGGTGGAAGATGTACCTTCAAATGCAACAAAGCAGAAAGTTGAGGCTGCTAAGCAATACATTGAGAACCATTACAAATCTCAAATGAAGTCATTGCAAGATAGGAAGGAGAGACGTTGGGTGTTGGAGAGGAGGCTTGCTGATGCCGATGTTTCTGAAGAAGACCAAATAAATGTGCTTAAATATTTAGAGAGGAAGGAGACGGAATATATGCGTCTTCAAAGACATAAATTGGGTGTAGATGACTTTGAACTTTTGACAATTATCGGAAGAGGTGCATTCGGGGAGGTTAGACTTTGTAGAGAAAAAACAACAGGCCATGTGTATGCGATGAAGAAGCTTATGAAATCCGAGATGCTTCGCAGAGGCCAGGTGGAACATGTCAAAGCTGAAAGAAATCTTCTAGCAGAGGTTGACAGTGCCTATATTGTGAAGCTATACTGTTCCTTCCAGGATGCCGAGTTTTTGTATCTTATAATGCAATATCTTCCTGGAGGTGATATGATGACACTGTTAATGCGCAAGGACACTTTGACAGAGGATGAGGCCAGGTTTTATGTTGGGGAGACAGTTCTTGCTATAGAGTCGATTCACAAGCATAATTACGTTCACAGAGACATCAAGCCCGATAATTTACTGCTTGATCGTTATGGCCACATCAAACTGTCAGATTTTGGGTTGTGTAAGCCCTTGGAGTCTAGTAGCTTCCCAAATCTCTCCGAGCAAGAGAATGTAACTGGAAGGAACTCCAGATCTTCCGTGGAAAATGATAGTCAGTTTAGCTCACTCTCTGTGTCAGGACGGACACAACAAGAACAATTGATGCATTGGCAAAAGAACAGACGGACATTGGCTTATTCAGCTGTTGGAACTCCAGACTATATTGCCCCAGAAGTGTTACTGAGAAAAGGATATGGAATAGAGTGTGACTGGTGGTCTCTTGGAGCAATTATGTATGAAATGCTTGTGGGATATCCACCTTTCTATTCTGATGATCCAATGTCTACATGTAGAAAGATAATTAACTGGAAAACTCATCTGAGATTCCCATTGGAGGCCAAGGTTTCTGTAGAGGCTAAAGATCTTATTTGCAAACTTCTATGCAATGTTGAGCAAAGGATTGGAACCAGAGGAGCTAATGAAATTAAGGCACACGCATGGTTTAAAGGTTTGCAATGGGATAAATTATATCAAATGGAAGCTGTCATCATCCCAGAGATCCATGATGAGTTAGACACTCAAAATTTTGAAAAGTTTGAAGAGATGGGCATACCGGGTCAAACTCCATCAAAGTCGGGTCCTAGGAGAAAGATGGTTTCAACCAAGGATGTGAATTTTGTTGGTTATACATACAAGAATTTCGAAATTGTTAATGAACATCACTTATCTGGCATCACTGAGATGAAGAAAAAGACTAATAAGACTAAGAGACCATCTGTTAAAACATTATTCGACACCCCAGTTTCTCAAGAGCAGCAGCCTATTCCTAGAGGTTTTACCAATCGTTTGCCAACCCAACCAGAGGTCTCGGAAAGCCCCGACCCATCGCCTCGTGCAATGAGATCAATGCTGCAGCAGAAGCCTCATGGGAGAAGCTAG 1668 41.73 MDSARSWLQKFHPRVKKETETEKEVEDVPSNATKQKVEAAKQYIENHYKSQMKSLQDRKERRWVLERRLADADVSEEDQINVLKYLERKETEYMRLQRHKLGVDDFELLTIIGRGAFGEVRLCREKTTGHVYAMKKLMKSEMLRRGQVEHVKAERNLLAEVDSAYIVKLYCSFQDAEFLYLIMQYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYVHRDIKPDNLLLDRYGHIKLSDFGLCKPLESSSFPNLSEQENVTGRNSRSSVENDSQFSSLSVSGRTQQEQLMHWQKNRRTLAYSAVGTPDYIAPEVLLRKGYGIECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIINWKTHLRFPLEAKVSVEAKDLICKLLCNVEQRIGTRGANEIKAHAWFKGLQWDKLYQMEAVIIPEIHDELDTQNFEKFEEMGIPGQTPSKSGPRRKMVSTKDVNFVGYTYKNFEIVNEHHLSGITEMKKKTNKTKRPSVKTLFDTPVSQEQQPIPRGFTNRLPTQPEVSESPDPSPRAMRSMLQQKPHGRS 555
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 38320155 38325351 - evm.model.ptg000014l.61 HCH14g1147 559050
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH14g1147 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH14g1147 555 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 479 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
HCH14g1147 555 CDD STKc_NDR_like 104 475 - -
HCH14g1147 555 CDD MobB_NDR_LATS-like 40 101 - -
HCH14g1147 555 SMART pkinase_C_6 412 476 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g1147 555 ProSiteProfiles AGC-kinase C-terminal domain profile. 412 484 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g1147 555 Pfam Protein kinase domain 308 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g1147 555 Pfam Protein kinase domain 107 258 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g1147 555 MobiDBLite consensus disorder prediction 11 31 - -
HCH14g1147 555 Gene3D Transferase(Phosphotransferase) domain 1 190 258 - -
HCH14g1147 555 Gene3D Transferase(Phosphotransferase) domain 1 306 429 - -
HCH14g1147 555 SMART serkin_6 106 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g1147 555 MobiDBLite consensus disorder prediction 260 285 - -
HCH14g1147 555 FunFam Non-specific serine/threonine protein kinase 190 257 - -
HCH14g1147 555 FunFam Non-specific serine/threonine protein kinase 77 189 - -
HCH14g1147 555 ProSiteProfiles Protein kinase domain profile. 106 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g1147 555 MobiDBLite consensus disorder prediction 491 555 - -
HCH14g1147 555 Pfam Protein kinase C terminal domain 431 474 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH14g1147 555 MobiDBLite consensus disorder prediction 11 32 - -
HCH14g1147 555 SUPERFAMILY Protein kinase-like (PK-like) 87 464 IPR011009 -
HCH14g1147 555 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524(InterPro)
HCH14g1147 555 Gene3D Phosphorylase Kinase; domain 1 104 189 - -
HCH14g1147 555 Gene3D Phosphorylase Kinase; domain 1 430 440 - -
HCH14g1147 555 FunFam Non-specific serine/threonine protein kinase 310 429 - -
HCH14g1147 555 MobiDBLite consensus disorder prediction 502 532 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH14g1147 HCH-Chr14:38320155 HCH6g1494 HCH-Chr6:48512087 1.40E-224 dispersed
HCH14g1147 HCH-Chr14:38320155 HCH12g0486 HCH-Chr12:2843049 1.00E-182 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81260 PF00069 Pkinase 1.50E-62 CL0016 HCH PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH14g1147 K08790 - csv:101208438 944.88