Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH14g1147 | ATGGATTCGGCGAGGAGTTGGTTACAGAAGTTTCATCCTAGAGTAAAGAAGGAAACTGAAACCGAAAAAGAGGTGGAAGATGTACCTTCAAATGCAACAAAGCAGAAAGTTGAGGCTGCTAAGCAATACATTGAGAACCATTACAAATCTCAAATGAAGTCATTGCAAGATAGGAAGGAGAGACGTTGGGTGTTGGAGAGGAGGCTTGCTGATGCCGATGTTTCTGAAGAAGACCAAATAAATGTGCTTAAATATTTAGAGAGGAAGGAGACGGAATATATGCGTCTTCAAAGACATAAATTGGGTGTAGATGACTTTGAACTTTTGACAATTATCGGAAGAGGTGCATTCGGGGAGGTTAGACTTTGTAGAGAAAAAACAACAGGCCATGTGTATGCGATGAAGAAGCTTATGAAATCCGAGATGCTTCGCAGAGGCCAGGTGGAACATGTCAAAGCTGAAAGAAATCTTCTAGCAGAGGTTGACAGTGCCTATATTGTGAAGCTATACTGTTCCTTCCAGGATGCCGAGTTTTTGTATCTTATAATGCAATATCTTCCTGGAGGTGATATGATGACACTGTTAATGCGCAAGGACACTTTGACAGAGGATGAGGCCAGGTTTTATGTTGGGGAGACAGTTCTTGCTATAGAGTCGATTCACAAGCATAATTACGTTCACAGAGACATCAAGCCCGATAATTTACTGCTTGATCGTTATGGCCACATCAAACTGTCAGATTTTGGGTTGTGTAAGCCCTTGGAGTCTAGTAGCTTCCCAAATCTCTCCGAGCAAGAGAATGTAACTGGAAGGAACTCCAGATCTTCCGTGGAAAATGATAGTCAGTTTAGCTCACTCTCTGTGTCAGGACGGACACAACAAGAACAATTGATGCATTGGCAAAAGAACAGACGGACATTGGCTTATTCAGCTGTTGGAACTCCAGACTATATTGCCCCAGAAGTGTTACTGAGAAAAGGATATGGAATAGAGTGTGACTGGTGGTCTCTTGGAGCAATTATGTATGAAATGCTTGTGGGATATCCACCTTTCTATTCTGATGATCCAATGTCTACATGTAGAAAGATAATTAACTGGAAAACTCATCTGAGATTCCCATTGGAGGCCAAGGTTTCTGTAGAGGCTAAAGATCTTATTTGCAAACTTCTATGCAATGTTGAGCAAAGGATTGGAACCAGAGGAGCTAATGAAATTAAGGCACACGCATGGTTTAAAGGTTTGCAATGGGATAAATTATATCAAATGGAAGCTGTCATCATCCCAGAGATCCATGATGAGTTAGACACTCAAAATTTTGAAAAGTTTGAAGAGATGGGCATACCGGGTCAAACTCCATCAAAGTCGGGTCCTAGGAGAAAGATGGTTTCAACCAAGGATGTGAATTTTGTTGGTTATACATACAAGAATTTCGAAATTGTTAATGAACATCACTTATCTGGCATCACTGAGATGAAGAAAAAGACTAATAAGACTAAGAGACCATCTGTTAAAACATTATTCGACACCCCAGTTTCTCAAGAGCAGCAGCCTATTCCTAGAGGTTTTACCAATCGTTTGCCAACCCAACCAGAGGTCTCGGAAAGCCCCGACCCATCGCCTCGTGCAATGAGATCAATGCTGCAGCAGAAGCCTCATGGGAGAAGCTAG | 1668 | 41.73 | MDSARSWLQKFHPRVKKETETEKEVEDVPSNATKQKVEAAKQYIENHYKSQMKSLQDRKERRWVLERRLADADVSEEDQINVLKYLERKETEYMRLQRHKLGVDDFELLTIIGRGAFGEVRLCREKTTGHVYAMKKLMKSEMLRRGQVEHVKAERNLLAEVDSAYIVKLYCSFQDAEFLYLIMQYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYVHRDIKPDNLLLDRYGHIKLSDFGLCKPLESSSFPNLSEQENVTGRNSRSSVENDSQFSSLSVSGRTQQEQLMHWQKNRRTLAYSAVGTPDYIAPEVLLRKGYGIECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIINWKTHLRFPLEAKVSVEAKDLICKLLCNVEQRIGTRGANEIKAHAWFKGLQWDKLYQMEAVIIPEIHDELDTQNFEKFEEMGIPGQTPSKSGPRRKMVSTKDVNFVGYTYKNFEIVNEHHLSGITEMKKKTNKTKRPSVKTLFDTPVSQEQQPIPRGFTNRLPTQPEVSESPDPSPRAMRSMLQQKPHGRS | 555 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 38320155 | 38325351 | - | evm.model.ptg000014l.61 | HCH14g1147 | 559050 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH14g1147 | 555 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 225 | 237 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH14g1147 | 555 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 24 | 479 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
HCH14g1147 | 555 | CDD | STKc_NDR_like | 104 | 475 | - | - | |
HCH14g1147 | 555 | CDD | MobB_NDR_LATS-like | 40 | 101 | - | - | |
HCH14g1147 | 555 | SMART | pkinase_C_6 | 412 | 476 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g1147 | 555 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 412 | 484 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g1147 | 555 | Pfam | Protein kinase domain | 308 | 411 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g1147 | 555 | Pfam | Protein kinase domain | 107 | 258 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g1147 | 555 | MobiDBLite | consensus disorder prediction | 11 | 31 | - | - | |
HCH14g1147 | 555 | Gene3D | Transferase(Phosphotransferase) domain 1 | 190 | 258 | - | - | |
HCH14g1147 | 555 | Gene3D | Transferase(Phosphotransferase) domain 1 | 306 | 429 | - | - | |
HCH14g1147 | 555 | SMART | serkin_6 | 106 | 411 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g1147 | 555 | MobiDBLite | consensus disorder prediction | 260 | 285 | - | - | |
HCH14g1147 | 555 | FunFam | Non-specific serine/threonine protein kinase | 190 | 257 | - | - | |
HCH14g1147 | 555 | FunFam | Non-specific serine/threonine protein kinase | 77 | 189 | - | - | |
HCH14g1147 | 555 | ProSiteProfiles | Protein kinase domain profile. | 106 | 411 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g1147 | 555 | MobiDBLite | consensus disorder prediction | 491 | 555 | - | - | |
HCH14g1147 | 555 | Pfam | Protein kinase C terminal domain | 431 | 474 | IPR017892 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH14g1147 | 555 | MobiDBLite | consensus disorder prediction | 11 | 32 | - | - | |
HCH14g1147 | 555 | SUPERFAMILY | Protein kinase-like (PK-like) | 87 | 464 | IPR011009 | - | |
HCH14g1147 | 555 | ProSitePatterns | Protein kinases ATP-binding region signature. | 112 | 135 | IPR017441 | GO:0005524(InterPro) | |
HCH14g1147 | 555 | Gene3D | Phosphorylase Kinase; domain 1 | 104 | 189 | - | - | |
HCH14g1147 | 555 | Gene3D | Phosphorylase Kinase; domain 1 | 430 | 440 | - | - | |
HCH14g1147 | 555 | FunFam | Non-specific serine/threonine protein kinase | 310 | 429 | - | - | |
HCH14g1147 | 555 | MobiDBLite | consensus disorder prediction | 502 | 532 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH14g1147 | HCH-Chr14:38320155 | HCH6g1494 | HCH-Chr6:48512087 | 1.40E-224 | dispersed | |
HCH14g1147 | HCH-Chr14:38320155 | HCH12g0486 | HCH-Chr12:2843049 | 1.00E-182 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81260 | PF00069 | Pkinase | 1.50E-62 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH14g1147 | K08790 | - | csv:101208438 | 944.88 |