Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH1g0015 ATGGCTTCTTTGTCTATTGCTTCGAAATCCAACCAAAAAGATGATGATCAGAATGTTCTGCAGAAGCATGCTGCCTTTTTCGATAGAAATCATGACGGCGTCGTTTACCCTTGGGAGACTTTCCAAGGTTTTCGTGCGATTGGGTGTGGTTTCTTGTTGTCCACAGCCGCGGCCGTCTTTATTAATATTGGCCTCAGCGGAAAAACTCGCCCGGGAAAATTCCCTTCTCCACTGTTCCCAATTGAAGTAAAGAATATCAAACTAGGCAAACATGGAAGTGATTCTGGAGTCTACGACACTGAGGGAAGGTTTATTCCTTCCAAATTTGAAGATATCTTTAGGAAGCATGCACAAGAACACCCCGACGCCTTAACATATAAAGAACTTAAGGCCATGCTCAAGGCGAACAGAGAGCCCAAGAACTATGCAGGATGGCTTGGTAGCTGGGCGGAGTGGAAGGTTCTGTATGATATTGGCAAAGACGAAAATGGTTTGCTGCACAAACAAACCATTAAGGCTGTGTACGACGGAAGCTTATTTGAACATTTGGAGAAATCGAGAGCATCTAAAGCACAAAAACAGAAAGCATAA 591 43.82 MASLSIASKSNQKDDDQNVLQKHAAFFDRNHDGVVYPWETFQGFRAIGCGFLLSTAAAVFINIGLSGKTRPGKFPSPLFPIEVKNIKLGKHGSDSGVYDTEGRFIPSKFEDIFRKHAQEHPDALTYKELKAMLKANREPKNYAGWLGSWAEWKVLYDIGKDENGLLHKQTIKAVYDGSLFEHLEKSRASKAQKQKA 196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1049428 1052251 + evm.model.ptg000006l.1273 HCH1g0015 538034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH1g0015 196 PANTHER PEROXYGENASE 3-RELATED 11 191 IPR007736 GO:0004497(PANTHER)|GO:0005509(PANTHER)
HCH1g0015 196 Pfam Caleosin related protein 16 183 IPR007736 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g0015 HCH-Chr1:1049428 HCH6g1469 HCH-Chr6:48343499 5.60E-46 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH1g0015 K17991 - rcu:8277337 289.656