Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH1g0138 | ATGGCACTGGTATTGCACGGCCACACTGGAAAGGCAAACAAAAATATTTTCAAGACTCTCATTGCTGCAGAGTACAATGGAGTCCAGGTTGATCGAATTCCGAATTTTGAGATTGGTGTCTCAAACAAAACTCCAGAATTTATCAAAATGAATCCTATTGGGAAGGTTCCTGTTCTACAAACTCCTGATGGCTCCATATTTGAGAGTAATGCAATTGCGCGTTATGTTGCGCGCTTGAAGATTGATAGTCCTCTGTATGGTTCTTCTCTTATAGATTATTGGATTGATTTTGCAACATTGGAGATAGATTCTAATCTTCTGAATTGGTTTAGGCCTAGGATCGGGCGAGCTGCTTATCTTCCTCCTGTAAGAAGCTTGAGAGCTCTGGGTGCTTTGAATACACACCTTGCTTCGAACACATACCTGGTTGGTCATTCTGTGACACTGGCTGATATCATCCTGACTTGCAATCTGCACTTGGGTTTTACTTGGCTCTTGACCAAGAGCTTTACCTATGAGTTCCCACATGTTGAGAGATACTTCTGGACCTTGGTCAATCAACCAAACTTTAGAAAAATTATGGGGGAGGTGAAGCAGGCAGATTCAGTTCCACCTGTTCAATCCGCTAAGAAACTCGAGGAACCTGCTAAGCAGGTGAAGGAGGAATCAAAAAAAGAAGCTGAGAAAGAGAAGCCAAAAGCTGAAGTTGGTGGAGGAGAGGATGAGGCACCAAAGCCCAAACCCAAAAATCCCCTTGATTTGCTGCCACCGAGTAAGATGATTCTGGATGAATGGAAGCGGCTATACTCGAACACCAAAACCAACTTTCGAGAGGTTGCAATTAAAGGATTTTGGGACATGTACGATCCAGAGGGATACTCTCTTTGGTTCTGTGATTACAAGTACGATGATGAGAATACTGTTTCCTTTGTGACACTCAACAAGGTTGGTGGATTTCTTCAGCGTATGGATCTGGCTCGTAAGTACGCTTTTGGGAAGATGTTAGTGATTGGATCAGAGCCTCCATTTAAAGTGAAGGGGTTGTGGATTTTTCGTGGTCAAGCGATACCACAACTTATCCTGGATGAGTGCTATGACATGGAGCTTTACGAGTGGACAAAGGTTGACATTTCCGACGATGCCCAGAAGGAACGCGTGAACCAGATGATTGAAGATCAAGAGCCTTTTGAAGGGGAGGCTCTGTTGGATGCCAAATGCTTCAAGTGA | 1227 | 43.85 | MALVLHGHTGKANKNIFKTLIAAEYNGVQVDRIPNFEIGVSNKTPEFIKMNPIGKVPVLQTPDGSIFESNAIARYVARLKIDSPLYGSSLIDYWIDFATLEIDSNLLNWFRPRIGRAAYLPPVRSLRALGALNTHLASNTYLVGHSVTLADIILTCNLHLGFTWLLTKSFTYEFPHVERYFWTLVNQPNFRKIMGEVKQADSVPPVQSAKKLEEPAKQVKEESKKEAEKEKPKAEVGGGEDEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYDDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWIFRGQAIPQLILDECYDMELYEWTKVDISDDAQKERVNQMIEDQEPFEGEALLDAKCFK | 408 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 10461383 | 10464529 | + | evm.model.ptg000006l.1150 | HCH1g0138 | 538157 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH1g0138 | 408 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 84 | IPR004045 | - | |
HCH1g0138 | 408 | CDD | GST_C_EF1Bgamma_like | 88 | 201 | - | - | |
HCH1g0138 | 408 | FunFam | Elongation factor 1B gamma | 1 | 76 | - | - | |
HCH1g0138 | 408 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 84 | 206 | IPR010987 | - | |
HCH1g0138 | 408 | SUPERFAMILY | eEF1-gamma domain | 248 | 408 | IPR036433 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
HCH1g0138 | 408 | Gene3D | Translation elongation factor EF1B, gamma chain, conserved domain | 248 | 408 | IPR036433 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
HCH1g0138 | 408 | Gene3D | - | 82 | 208 | - | - | |
HCH1g0138 | 408 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 248 | 408 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
HCH1g0138 | 408 | Pfam | Elongation factor 1 gamma, conserved domain | 247 | 354 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
HCH1g0138 | 408 | SUPERFAMILY | GST C-terminal domain-like | 84 | 204 | IPR036282 | - | |
HCH1g0138 | 408 | MobiDBLite | consensus disorder prediction | 204 | 255 | - | - | |
HCH1g0138 | 408 | SUPERFAMILY | Thioredoxin-like | 12 | 85 | IPR036249 | - | |
HCH1g0138 | 408 | SMART | EF1G_2 | 247 | 355 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
HCH1g0138 | 408 | CDD | GST_N_EF1Bgamma | 8 | 79 | - | - | |
HCH1g0138 | 408 | MobiDBLite | consensus disorder prediction | 213 | 248 | - | - | |
HCH1g0138 | 408 | Pfam | Glutathione S-transferase, C-terminal domain | 126 | 188 | IPR004046 | - | |
HCH1g0138 | 408 | Gene3D | Glutaredoxin | 2 | 76 | - | - | |
HCH1g0138 | 408 | Pfam | Glutathione S-transferase, N-terminal domain | 15 | 78 | IPR004045 | - | |
HCH1g0138 | 408 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 1 | 408 | IPR044628 | GO:0004364(InterPro) | |
HCH1g0138 | 408 | FunFam | Elongation factor 1-gamma 1 | 248 | 408 | - | - | |
HCH1g0138 | 408 | SFLD | Glutathione Transferase (cytosolic) | 15 | 181 | IPR040079 | - | |
HCH1g0138 | 408 | FunFam | Elongation factor 1 gamma | 83 | 207 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH12g1554 | HCH-Chr12:42179859 | HCH1g0138 | HCH-Chr1:10461383 | 2.70E-183 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH1g0138 | K03233 | - | vvi:100264325 | 650.203 |