Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH1g0194 ATGGTCAGATTCATCCGCCAGGAAGAATTCAATATTGAAAAGCTGCAATTAGTTGAGGCAGAGAAAAAGAAGATCAGGCAAGATGAGTACTCCATGCAACTTAATGCTTCCCGGATCAAAGTTCTGCAAGCCCAGGATGATGTTGTGAATTCTACGGATGAGGCAACATCAAAGGAGCTTCTGCATGTTAACCATGATCACCATGTCTACAAACATCTTCTGAAAGATCTCATTGTTCAGATCTTACTTAGATTGAAAGAGCCTGCTATTTTATTGCGATGCCGCAAAGATGACCTCATTTTGGTGGAATCTTTACTGAGCTCAGCAGCTGAGGAATATGCAGATAAAGCAAAGGTTCACGAACCAGAGATCATTATCGACCATAACACCCTTGATTCTCGGTTTGATGTTTTCTTCCGTAAAAAACTTCCAAAG 435 40.92 MVRFIRQEEFNIEKLQLVEAEKKKIRQDEYSMQLNASRIKVLQAQDDVVNSTDEATSKELLHVNHDHHVYKHLLKDLIVQILLRLKEPAILLRCRKDDLILVESLLSSAAEEYADKAKVHEPEIIIDHNTLDSRFDVFFRKKLPK 145
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20030407 20032268 + evm.model.ptg000006l.1094 HCH1g0194 538213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH1g0194 145 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 7 128 IPR002842 GO:0033178(InterPro)|GO:0046961(PANTHER)|GO:0046961(InterPro)|GO:1902600(InterPro)
HCH1g0194 145 Pfam ATP synthase (E/31 kDa) subunit 14 128 IPR002842 GO:0033178(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
HCH1g0194 145 Gene3D - 52 145 IPR038495 -
HCH1g0194 145 SUPERFAMILY V-type ATPase subunit E-like 47 144 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g0194 HCH-Chr1:20030407 HCH1g0343 HCH-Chr1:50101046 1.00E-52 dispersed
HCH1g0194 HCH-Chr1:20030407 HCH1g0195 HCH-Chr1:20033620 1.70E-31 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH1g0194 K02150 - mdm:103454644 201.445