Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH1g0208 | TATGGATCGATATTCAGGACTAGTTTGGTGGGAAAACCAATTATTATCTCAACAGACCCTGACTTTAGTTACTTCATTTTTCAACAAGAGGGACAGCTGTTCCAGAGCTGTTATCCAGATACCTTCACAGAGATATTTGGAAGGCAAAATGTTGGTTCCTTGCATGGCTTCATGTATAAATATCTAAAGAACATGGTTCTTCATCTTTTTGGTCCTGAAAGTCTGGAAAAGATGATTCCTGAAGTTGAAGCTGTTGCAACTACAAGATTGAGACGGTGGTCATCTCATAACGCACTTGAAATGAAGGACAAGACTGCAAGTAAACTAATTAGTTATGATCAAGAACATTCGTCAGAGAATTTGAGAGATAACTTTGTTGCATTCATTCAGGGTTTGATCTCCTTCCCTCTAGATATTCCTGGAACAACTTATCACAAATGCTTGCAGGGAAGGAAAAGAGCGATGAGGATGCTAAAAAACATGCTACAAGAAAGGCGGGAAAATCCAAGGAAACAACAAACTGATTTTTTTGATTTTGAAATTGCTTTAGACCTGATGTTTGTGCTACTTTTTGCAAGCTTTGAAACTACTTCACTAGCTCTAACTGCAGCCGTTAAATTTCTCATTGATCACCCTCACGTGCTGAAGGAGTTAACGGTGCTCATTCTGCACTTGAAATCTACTTACAAATCAGCTTTAAAAATGACTCTTGATGGCAGATGGACT | 726 | 38.43 | YGSIFRTSLVGKPIIISTDPDFSYFIFQQEGQLFQSCYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLHLFGPESLEKMIPEVEAVATTRLRRWSSHNALEMKDKTASKLISYDQEHSSENLRDNFVAFIQGLISFPLDIPGTTYHKCLQGRKRAMRMLKNMLQERRENPRKQQTDFFDFEIALDLMFVLLFASFETTSLALTAAVKFLIDHPHVLKELTVLILHLKSTYKSALKMTLDGRWT | 242 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 30058158 | 30060969 | + | evm.model.ptg000006l.508 | HCH1g0208 | 538227 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH1g0208 | 242 | PANTHER | CYTOCHROME P450 26 | 1 | 219 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| HCH1g0208 | 242 | SUPERFAMILY | Cytochrome P450 | 1 | 218 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0208 | 242 | Gene3D | Cytochrome P450 | 1 | 235 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0208 | 242 | Pfam | Cytochrome P450 | 1 | 218 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH1g0208 | HCH-Chr1:30058158 | HCH6g0940 | HCH-Chr6:44195356 | 5.50E-112 | dispersed | |
| HCH1g0208 | HCH-Chr1:30058158 | HCH2g0246 | HCH-Chr2:37816321 | 2.70E-10 | wgd | |
| HCH1g0208 | HCH-Chr1:30058158 | HCH3g1122 | HCH-Chr3:33024937 | 1.60E-74 | wgd |
Pathway information