Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH1g0243 | ATGGGAAATTTCTCTTTTTCATCTGACTCAGATGGATCCTGCAACATTGGAATTCTAATTCTGGCCATTTTTTCATCATGGATCATCATCCACAGATGGAACCAAAGGAACAGAAAGGGTCCAAAAACATGGCCACTTGTAGGAGCAGCAATCGAACAGCTTGTTAACTACGATAAAATGCATGATTGGATTCTCAATTATCTCAATCAATCAAAGACTGTGATCGTCCCTATGCCCTTCACAACTTATACTTATATTGCAGATCCTGCTAACGTTGAACATATTCTCAAGACCAACTTTGTTAATTATCCAAAGGGTGATATTTACCATTCTTACATGGAAGTTCTTCTTGGCCATGGAATCTTCAATGTAGATGGAGAGCTATGGAGGAAGCAAAGGAAGACTGCTAGCTTTGAATTTGCATCAAAGAATTTGAGGGATTTTAGTACCTTGGTTTTCAGAGAGTATAGCCTCAAACTCTCTACCATTTTAACTCTGGCTTCTTTCAACAACCAACAACTTGACATGCAGGAATTGTTGATGAGAATGACTTTGGATTCCATATGTAAAGTGGGATTTGGTGTAGAAATTGGAACATTGGCTCCCAATTTGCCAGACAATCGTTTTGCTAAGGCTTTCGATACAGCAAACATCATTGTTACTCTTCGCTTCATTGATCCTCTGTGGAAAATTAAAAGGTTTTTTAATTTGGGATCTGAAGCTCTTCTTGATAAGTCCATCAAAGTCATTGATGAGTTCACTTACTCGGTTATTAGGACAAGGAAAAACGAGATACAACAAGCTCGCAAAGATAATTGTAATAATAAGATAAAACATGATATATTGTCAAGATTCATAGAATTGGGTGAAGATCCAGAGAATAATTTGACAGATAAAAGCTTGAGAGACGTCGTTCTTAACTTTGTAATCGCGGGACGCGACACGACAGCGACGACGCTTTCATGGGCTATTTACATGCTAATAACTCATCCTCATGTAGCTGAGAAGCTTTACTTGGAGCTTAAGAAATTTGAAGAAGAAGTTGAAGAAGAAGAAAGAGATAATTATGATCTTCCATTCTTTGAAAGAAGAGTAACGCAATTTGCACAACTTCTCAGTTATGATTCACTTGGAAAATTATATTATTTGCATGCTCTCATAACTGAGACTCTTCGTTTGTACCCTGCAGTTCCTCAGGATCCAAAGGGCATTTTGGAAGATGATATATTGCCAGATGGTACAAAAGTAAAAGCAGGAGGAATGGTCACATATGTTCCTTACTCAATGGGAAGGATGGAATACAATTGGGGTTCTGATGCATCTTCTTTTAAACCAGAAAGATGGCTCAACAAACAAGGTTTTTTCCAAAATGAATCTCCATTCAAGTTCACTGCTTTTCAGGGTGGACCAAGGATATGCCTGGGGAAAGATTCAGCATATCTACAAATGAAGATGGCATTGGCCATTTTGTGTAGATTTTACAAATTCCATTTGGTGGAAGGGCATCAAGTGAATTACAGAATGATGACAATTCTATCAATGGCTAATGGCTTGAAAGTTACCATAGCTAGACGCGATTGA | 1581 | 37.89 | MGNFSFSSDSDGSCNIGILILAIFSSWIIIHRWNQRNRKGPKTWPLVGAAIEQLVNYDKMHDWILNYLNQSKTVIVPMPFTTYTYIADPANVEHILKTNFVNYPKGDIYHSYMEVLLGHGIFNVDGELWRKQRKTASFEFASKNLRDFSTLVFREYSLKLSTILTLASFNNQQLDMQELLMRMTLDSICKVGFGVEIGTLAPNLPDNRFAKAFDTANIIVTLRFIDPLWKIKRFFNLGSEALLDKSIKVIDEFTYSVIRTRKNEIQQARKDNCNNKIKHDILSRFIELGEDPENNLTDKSLRDVVLNFVIAGRDTTATTLSWAIYMLITHPHVAEKLYLELKKFEEEVEEEERDNYDLPFFERRVTQFAQLLSYDSLGKLYYLHALITETLRLYPAVPQDPKGILEDDILPDGTKVKAGGMVTYVPYSMGRMEYNWGSDASSFKPERWLNKQGFFQNESPFKFTAFQGGPRICLGKDSAYLQMKMALAILCRFYKFHLVEGHQVNYRMMTILSMANGLKVTIARRD | 526 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 39877282 | 39879950 | - | evm.model.ptg000006l.1082 | HCH1g0243 | 538262 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH1g0243 | 526 | PRINTS | P450 superfamily signature | 464 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0243 | 526 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0243 | 526 | PRINTS | P450 superfamily signature | 385 | 396 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0243 | 526 | PRINTS | P450 superfamily signature | 473 | 484 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0243 | 526 | SUPERFAMILY | Cytochrome P450 | 30 | 525 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0243 | 526 | FunFam | Alkane hydroxylase MAH1 | 34 | 526 | - | - | |
| HCH1g0243 | 526 | Pfam | Cytochrome P450 | 40 | 515 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0243 | 526 | Gene3D | Cytochrome P450 | 26 | 526 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0243 | 526 | PANTHER | CYTOCHROME P450 | 26 | 518 | - | - | |
| HCH1g0243 | 526 | CDD | CYP86A | 72 | 518 | - | - | |
| HCH1g0243 | 526 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0243 | 526 | PRINTS | E-class P450 group I signature | 384 | 402 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0243 | 526 | PRINTS | E-class P450 group I signature | 473 | 496 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0243 | 526 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0243 | 526 | PRINTS | E-class P450 group I signature | 463 | 473 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH1g0243 | 526 | Coils | Coil | 334 | 354 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH1g0243 | HCH-Chr1:39877282 | HCH7g1563 | HCH-Chr7:48070636 | 1.00E-115 | dispersed | |
| HCH1g0243 | HCH-Chr1:39877282 | HCH9g1267 | HCH-Chr9:37110165 | 1.30E-28 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH1g0243 | K20495 | - | mdm:103451801 | 832.787 |